Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq2 86.0 6e-12
>seq2
Length=4789688
Score = 86.0 bits (94), Expect = 6e-12
Identities = 164/238 (69%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 50491 ACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGG 50550
|||| ||| || ||||||| ||||| | ||||| | ||||| ||| | |||||
Sbjct 2859676 ACATCATCACCGACGCCGTCGCGATCGAGCAGGAGTTCCTGACGGATGCTCTGCCCGTCA 2859617
Query 50551 CATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGA- 50609
|| | ||||||||||| | | |||||| ||||||| ||||| || || ||| ||
Sbjct 2859616 ACCTGCTTGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGAC 2859557
Query 50610 TTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTAT 50668
|| | || || ||| |||| ||| ||||| || || || ||||| || ||
Sbjct 2859556 TTCTCGTGGCTCTTGG--CAACAAGAAGTACTACAACGCCACCAATCCCTTCGACTTCAT 2859499
Query 50669 GAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50726
| | ||||| ||| || ||||| || ||||| ||||| | ||||| || || |||
Sbjct 2859498 GGACAACATCTCGCTGTCCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 2859441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543798475600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |