Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 6e-12 >seq2 Length=4789688 Score = 86.0 bits (94), Expect = 6e-12 Identities = 164/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 50491 ACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGG 50550 |||| ||| || ||||||| ||||| | ||||| | ||||| ||| | ||||| Sbjct 2859676 ACATCATCACCGACGCCGTCGCGATCGAGCAGGAGTTCCTGACGGATGCTCTGCCCGTCA 2859617 Query 50551 CATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGA- 50609 || | ||||||||||| | | |||||| ||||||| ||||| || || ||| || Sbjct 2859616 ACCTGCTTGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGAC 2859557 Query 50610 TTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTAT 50668 || | || || ||| |||| ||| ||||| || || || ||||| || || Sbjct 2859556 TTCTCGTGGCTCTTGG--CAACAAGAAGTACTACAACGCCACCAATCCCTTCGACTTCAT 2859499 Query 50669 GAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50726 | | ||||| ||| || ||||| || ||||| ||||| | ||||| || || ||| Sbjct 2859498 GGACAACATCTCGCTGTCCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 2859441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543798475600