Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 187 2e-42 seq7 116 4e-21 seq3 105 6e-18 seq1 95.1 1e-14 >seq2 Length=4789688 Score = 187 bits (206), Expect = 2e-42 Identities = 354/516 (69%), Gaps = 9/516 (2%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || ||||| || ||| ||||||| Sbjct 2859438 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGACAGCGAGATGTTGTC 2859497 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| || ||| | ||||| |||| ||| | ||| | ||||| || Sbjct 2859498 CATGAAGTCGAAGGGATTGGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGCCACGAGAAG 2859557 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 |||||| || || ||||| ||||||| ||||||| || ||||||||||| |||| Sbjct 2859558 TCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGGTT 2859617 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || |||| || ||| | ||||||| ||| || | || || || ||| ||| Sbjct 2859618 GACGGGCAGAGCATCCGTCAGGAACTCCTGCTCGATCGCGACGGCGTCGGTGATGATGTT 2859677 Query 120591 GAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGG---CACGC 120647 | | | | | || || | | | | | || | || || || |||| || || Sbjct 2859678 CTGGACAATCT--CCTTGC-TAGGGCGGTGGTTGAG-GT--GGGAGAACAGCAGACAAGC 2859731 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 |||||| |||||||| ||||| || || || |||||||||||| || || || || || Sbjct 2859732 AAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCAGG 2859791 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||| | || | |||| | |||| || | |||||| ||| || ||||| | ||| Sbjct 2859792 CATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGATGCC 2859851 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827 |||||| ||| ||||| || | |||| || || || | | |||| | ||||| Sbjct 2859852 CTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGGTGGACTCCTTGTCCTGAATCCA 2859911 Query 120828 CTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 ||| ||||||||||| ||||| ||||| | ||| || Sbjct 2859912 CTTGATGGCCCACTCAGCCTTCTTGCGGATGCAAGG 2859947 >seq7 Length=1958609 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| |||||||| ||| | |||| ||| |||||| ||||||||||||||| Sbjct 430517 CTCCTTCTGGATATTGTAGTCGGAGAGCGTGCGACC-GTCCTCAAGCTGCTTGCCCGCGA 430575 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || | ||||||||||| || ||||| || |||||||| |||||| ||| | | Sbjct 430576 AGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTCACGT 430635 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||| | | ||| || || | || | ||| || ||||||||||| || | Sbjct 430636 TGTCGATTGTGTCAGAGCTCTCGACCTCCAGCGTAATGGTCTTTCCGGTCAGAGTCTTCA 430695 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 430696 CGAAGATCTGCAT 430708 Score = 114 bits (126), Expect = 1e-20 Identities = 133/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || || || ||| | |||| ||| |||||| |||||||||| Sbjct 431252 GGTGGACTCCTTCTGGATGTTATAGTCGGAGAGCGTGCGACC-GTCCTCAAGCTGCTTGC 431310 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 ||||| | || | ||||||||||| || ||||| || |||||||| |||||| || Sbjct 431311 CCGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGACT 431370 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 ||| | || | |||||| | | |||||| || | ||||| || |||||||||| Sbjct 431371 TGACGTTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCA 431427 Score = 104 bits (114), Expect = 2e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| ||| | || || ||||||||||| || ||||| || |||||| Sbjct 431010 TCCTCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTG 431069 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | |||||| | | |||||| || | ||||| Sbjct 431070 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCACCTCCAGGGTGATA 431129 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650 || |||||||| || || || |||| Sbjct 431130 GTCTTGCCGGTGAGGGTCTTGACGA 431154 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||| || || ||| | | | ||||| |||||||| || Sbjct 430740 GTAGACTCCTTCTGAATATTGTAGTCTGACAAGGTGCGGCCA-TCCTCCAGCTGCTTACC 430798 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || || || || |||||||| ||| || ||| Sbjct 430799 AGCGAAGATAAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTT 430858 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | | || || |||| ||| | ||| || ||||| || || Sbjct 430859 CACGTTATCGATGGTATCTGACGATTCGACTTCGAGGGTAATGGTCTTTCCGGTGAGGGT 430918 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 430919 CTTGACGAAAATCTGCAT 430936 >seq3 Length=4355815 Score = 105 bits (116), Expect = 6e-18 Identities = 133/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| | | | |||||||||||||| || ||| | || Sbjct 2043493 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA-TCCTCGAGCTGCTTACCAGCGAAGAT 2043551 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || ||||| || |||||||| ||||| ||||| | || Sbjct 2043552 AAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTC 2043611 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| ||||||| ||| | ||| || || ||||| || || ||||| Sbjct 2043612 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2043671 >seq1 Length=6618042 Score = 95.1 bits (104), Expect = 1e-14 Identities = 580/923 (63%), Gaps = 28/923 (3%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA---GTCGCTTT 148109 ||||| |||||| |||||||| ||||||||||| ||||| | || || | |||| Sbjct 2614540 GACTGAGACTGGTCGATGAACGCACCACGGTCAGCAGCCATCTGAAGGATATGGCGCTG- 2614598 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | |||||||| | |||||||| || |||||| | | || ||| | ||| Sbjct 2614599 --CGAGATCTCCCACACTGTCTTGTAGAGGGCCTTGATGTCTGCAGGGATGTTGGGAATG 2614656 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || || | | |||| || | || ||| | ||| | | ||| Sbjct 2614657 TTCTGAATAGAACCACCTTCGGCAATGATACGGTTCTTCATGTTGTCAGACCAGAGGCCA 2614716 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 || |||| || || | || ||| | | || || || || ||||||||||| || || Sbjct 2614717 AGGTCGACAAGATCCTTGAGCAGCCAGGGGTTGACAACTTGGAACTCGCCGGCAAGAACA 2614776 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || ||| | ||| || | || || || | || || ||| | ||||| Sbjct 2614777 CGACGGGAATAGATGTTCGAGGTGTAGGGCTCGAAGCATTCATTAAAGCCGAGGATCTGA 2614836 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 ||| | || |||||||| || || |||| |||||| | |||| | || Sbjct 2614837 CTGGTGCTCGCAGTGGGCATAGGAGCCACGAGCAAGCTGTTGCGGACACCGTGCTTGGCG 2614896 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || | |||||| | ||| |||||||| | || ||| || ||||||||| Sbjct 2614897 ATCTCAGCCTTCAGCGAGCTCCAATCCCAGAGGTCAGTGGGAGTCCTGTCCCACATGTCA 2614956 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 ||||| ||||| || || | || ||| || || | |||| || ||| | Sbjct 2614957 TACTGGAGAATTCCCTGGGAGACTGGCGAGCCTTCATATGTCTCATACGTGCCATGCTGC 2615016 Query 148530 GCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTG 148589 |||| ||| ||| ||| || |||| ||| || |||||| || || || Sbjct 2615017 TTGGCCAACTCGACCGACGCGGTGAGGGCACCGTGGTAGATAGTCTCGAAGATCTGAATG 2615076 Query 148590 TTGAGCAGC---GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCG 148646 || ||| || ||| | | | ||| | |||| ||||| | || || ||| Sbjct 2615077 TTCAGCTGCCTAGCCTCAGGAGAG---TCGAATGGCAAGCGCAGTGCAAGGAATGCATCG 2615133 Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706 ||||| || | || || | |||| || ||||| | |||| || ||| Sbjct 2615134 GCAAGACCATTGACACCAAGAGCAATCGGACGGTGGCGGAGGTTGCTCTTCTTGGC-CTC 2615192 Query 148707 TCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTG 148764 | || | || |||| |||| ||||||||||||| |||| ||||| || | |||| | Sbjct 2615193 TGGAACAGGGTAGTAGTTGATATCGATGATCTTGTTCAAG-TTGCGAACGAGGACCTGGG 2615251 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCA---------TCTACGATGCATCGGT 148815 | | | ||||| |||| || |||| | || || |||| | | || Sbjct 2615252 TGACCTCGTGCAGCTTGCCAAAGTCATACTCGCCACGGGCAGCGTCGACGAAGG-TAGG- 2615309 Query 148816 TCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGA 148875 || || | |||||| | ||||| || || ||| || |||||||| ||||| | | Sbjct 2615310 -CAATGCAAGAGAGGCCAAGTTGCAGACAGCAACCTCGTCAGGGGCGCTATACTCGATAA 2615368 Query 148876 TCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGT 148935 |||| | ||| || ||| || ||| |||| |||||| || |||||||| |||| Sbjct 2615369 TCTCAGTGCAGAGGTTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGT 2615428 Query 148936 TGCACGCGTCCTTGTACAGCATG 148958 |||| || ||||||||||||||| Sbjct 2615429 TGCAAGCATCCTTGTACAGCATG 2615451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420600588920