Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq2 109 5e-19
>seq2
Length=4789688
Score = 109 bits (120), Expect = 5e-19
Identities = 335/514 (65%), Gaps = 7/514 (1%)
Strand=Plus/Minus
Query 46758 GTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCC 46817
|| || ||| | ||||| ||||| |||||||||| |||||||| || | || ||
Sbjct 2859950 GTTCCTTGCATCCGCAAGAAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGAGTCC 2859891
Query 46818 ACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGT 46877
|| | || |||| | || || ||||| || || ||| | || || || |||
Sbjct 2859890 ACCTTTGCTCAGCGTCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCC 2859831
Query 46878 TTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAAC 46937
||||| | || || | | || | || | ||||| || || || ||| |||
Sbjct 2859830 TTTGCTTCGATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAAC 2859771
Query 46938 GAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTACAAGAC 46996
||| ||||||| || || || || || ||||| |||||||| ||||| || || |
Sbjct 2859770 GAGCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTTGCTTGTCTGCTGTTCT----C 2859715
Query 46997 GCGCGTGAATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGGGAGGCGGTGAG 47056
| | | || | | | ||| | ||| || ||| | | || || ||
Sbjct 2859714 CCACCTCAACCACCGCCCTAGCAAGGAGATTGTCCAGAACATCATCACCGACGCCGTCGC 2859655
Query 47057 CATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACA 47116
||||| ||||||| | || | || ||||||||| | |||| ||||||||||| |
Sbjct 2859654 GATCGAGCAGGAGTTCCTGACGGATGCTCTGCCCGTCAACCTGCTTGGCATGAACGCCAA 2859595
Query 47117 GTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC- 47175
| |||||| | || || ||||| || || || || || | ||| || || ||||
Sbjct 2859594 GCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGACTTCTCGTGGCTCTTGG-CAACA 2859536
Query 47176 CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCA 47235
||| || | || || ||||| || || || ||| ||||||| ||||| ||||
Sbjct 2859535 AGAAGTACTACAACGCCACCAATCCCTTCGACTTCATGGACAACATCTCGCTGTCCGGCA 2859476
Query 47236 AAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
| ||||| || |||||||| || ||||| || ||
Sbjct 2859475 AGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 2859442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611003397880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |