Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 161 1e-33
seq1 113 6e-19
>seq2
Length=4789688
Score = 161 bits (178), Expect = 1e-33
Identities = 218/299 (73%), Gaps = 5/299 (2%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||||||||| ||||| || |||||| | ||||
Sbjct 2860336 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCCTTCTGGACTGCAGAGGAGATTGACC 2860278
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
| | ||| | ||||| ||| ||| ||| || |||||| | ||||||
Sbjct 2860277 TGTCCAAGGACCTTCACGACTGGAACAACCGCCTGAACGATGATGAGCGCTACTTCATCT 2860218
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|||||||||||||| || |||||| ||| || ||||| ||| ||||||| |
Sbjct 2860217 CCCACGTCCTCGCCTTCTT-CGCCGCGTCCGACGGAATCGTCAACGAAAACCTGGTGGAG 2860159
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | |||||||| | || ||||| |||| || || || |||||||||
Sbjct 2860158 CGCTTCAGCGGGGAGGTCCAGGTCCCCGAGGCTCGTTGCTTCTATGGTTTCCAGATCATG 2860099
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070
|| || ||||||||||| || |||||||| || || || ||||||||| ||||||| ||
Sbjct 2860098 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCC 2860040
Score = 120 bits (132), Expect = 4e-21
Identities = 185/259 (71%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| ||| ||||||| ||||||| | ||||| | | || | ||||| ||
Sbjct 2859674 ATCATCACCGACGCCGTCGCGATCGAGCAGGAGTTCCTGACGGATGCTCTGCCCGTCAAC 2859615
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| | ||||||||||||| |||||||||||||||||| | | || ||||| ||||| |
Sbjct 2859614 CTGCTTGGCATGAACGCCA-AGCTCATGTGCCAGTACATCG-AGTTCGTCGCTGACCGAC 2859557
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| |||| ||| || ||| | ||||| ||||| | |||| || ||| | |||
Sbjct 2859556 TTCTCGTGGCTCTTGGCAAC-AAGAAGTACTACAACGCCACCAATCCCTTCGACTTCATG 2859498
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
|| |||||||| |||||||||||||| |||||| || || || || |||
Sbjct 2859497 GACAACATCTCGCTGTCCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 2859438
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
|||||||| |||| ||||
Sbjct 2859437 AAGGCCGGTGTCATGGCCA 2859419
Score = 96.9 bits (106), Expect = 5e-14
Identities = 121/158 (77%), Gaps = 11/158 (7%)
Strand=Plus/Minus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGAT-CA--ACAAGGAGGGCCTCGACACTTTGCCG 1456179
|| ||||| || ||||| || |||||||| || |||||||| || || ||||||
Sbjct 2859935 AAGAAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGAG----TCCAC-CTTTGCTC 2859881
Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCC 1456237
|||| ||||| | ||| ||||| || ||||||||||| ||||| ||| || ||| |
Sbjct 2859880 AGCGTCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTT-TGCTTCG 2859822
Query 1456238 ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||| ||||| |||||||| || || ||||| |||||
Sbjct 2859821 ATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCT 2859784
>seq1
Length=6618042
Score = 113 bits (124), Expect = 6e-19
Identities = 200/289 (69%), Gaps = 2/289 (1%)
Strand=Plus/Minus
Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953
||||| ||| ||| ||||| ||| || | || || || || || ||||| || || |
Sbjct 2616137 ATGTCCCAGAAGTACTTCAC-TCATGCTTCTCCAACCCTGTTCAACGCCGGTACTCCTCA 2616079
Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013
|||||| | || ||||| || | |||||||||| || || ||||| || ||
Sbjct 2616078 GCCGCAGCTCGCCTCCTGCTTCCTCGTCGACATGAAGGAAGACAGCATTGAGGGTATTTA 2616019
Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073
||||| |||||| || ||||| ||||| ||| | || || || || ||| | |
Sbjct 2616018 CGACACTCTCAAGACTTGTGCGCTGATCTCAAAGACCGCTGGTGGTATTGGTCTCAACAT 2615959
Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133
||| | |||||| | ||| ||||| | | || ||||| || |||||||| |
Sbjct 2615958 CCACCGTATCCGCGCCACCGGCTCCTACATCTCTGGTACCAATGGATCTTCCAACGGAAT 2615899
Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
||| |||||||| || || || ||| |||| || | ||||||||||||
Sbjct 2615898 TGTCCCCATGCTCCGGGTCTTCAACAACACTGCCAGATACGTCGACCAG 2615850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177808017089346
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |