Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq7 125 6e-24
seq1 89.7 5e-13
seq3 87.8 2e-12
>seq7
Length=1958609
Score = 125 bits (138), Expect = 6e-24
Identities = 179/248 (72%), Gaps = 8/248 (3%)
Strand=Plus/Plus
Query 35495 ATCATCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGA 35554
|||| | ||| || |||||||| | || | |||| || | || |||||||| ||
Sbjct 430467 ATCAACCCTTAGTTACCACCACGGAGTCTGAGAACCAGGTGGAGAGTGCTCTCCTTCTGG 430526
Query 35555 ATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGC 35614
|| ||||| |||| | || || |||| || |||||||| ||||| || ||||| |||
Sbjct 430527 ATATTGTAGTCGGAGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGC 430586
Query 35615 TGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGT 35673
|||||||| | || | | |||||||||| |||||| ||||| |||| | | ||
Sbjct 430587 TGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTCA-CGTTGTCGATTGT 430645
Query 35674 GTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATAT 35730
||| |||| || ||||||| ||| || || || || |||| ||| ||||| || ||
Sbjct 430646 GTCAGAGCTC---TCGACCTCCAGCGTAATGGTCTTTCCGGTCAGAGTCTTCACGAAGAT 430702
Query 35731 CTGCATTC 35738
||||||||
Sbjct 430703 CTGCATTC 430710
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | | ||||| || | || |||||| || ||||| || ||||
Sbjct 431221 TTCCACCACGGAGACGAAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGG 431280
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| || || |||| || |||||||| ||||| || ||||| ||||||||||| | |
Sbjct 431281 AGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGG 431340
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCC 35686
| | | |||||||||| |||||| ||| | |||| | | ||||||||||| |||
Sbjct 431341 GGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGCTCGACTCC 431399
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCA 35714
||||| | ||||| || || || ||||
Sbjct 431400 ACCTCAAGGGTGATAGTCTTGCCGGTCA 431427
Score = 104 bits (114), Expect = 2e-17
Identities = 148/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | || || | || | || |||||||| || ||||| || ||||
Sbjct 430936 TTCCACCACGCAGACGCAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGG 430995
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| ||| || | || || |||||||| || || || |||| ||||||||||| | |
Sbjct 430996 AAAGGGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGG 431055
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCC 35686
| | | |||||||||| |||||| ||| | |||| | | ||||||||||| |||
Sbjct 431056 GGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGCTCGACTCC 431114
Query 35687 ACCTCCACCGTGATCGTTTTACCCGT 35712
||||||| ||||| || || || ||
Sbjct 431115 ACCTCCAGGGTGATAGTCTTGCCGGT 431140
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||| ||||| || | |||||| || | || |||||||||||||| || ||
Sbjct 430745 CTCCTTCTGAATATTGTAGTCTGACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAA 430804
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| |||| | |||||||||| ||| || ||||| |
Sbjct 430805 GATAAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTTCACGTT 430864
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | || || |||||| || || | || || || || || || | || || ||
Sbjct 430865 ATCGATGGTATCTGACGATTCGACTTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGAC 430924
Query 35725 AAATATCTGCATTC 35738
|| ||||||||||
Sbjct 430925 GAAAATCTGCATTC 430938
>seq1
Length=6618042
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || ||||| || | || |||||| || ||||||||||| |
Sbjct 1741421 CCACCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAG 1741362
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || |||| |||||||||||||| || || |||| ||||||||||||| ||
Sbjct 1741361 AGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1741302
Query 35630 ACGCTCTCCTTGTC 35643
| | |||||||||
Sbjct 1741301 ATACCCTCCTTGTC 1741288
>seq3
Length=4355815
Score = 87.8 bits (96), Expect = 2e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| ||| || || || | || || ||||||||||| || || |
Sbjct 2043491 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 2043550
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
| | ||||||||||||| || | | |||||||||| ||||| ||| | ||||
Sbjct 2043551 TAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTG 2043609
Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||||||||| || || || | || || || |||||||||| || || ||
Sbjct 2043610 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2043669
Query 35726 AA 35727
||
Sbjct 2043670 AA 2043671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793414047640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |