Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 2e-19
seq3 96.9 4e-15
>seq2
Length=4789688
Score = 111 bits (122), Expect = 2e-19
Identities = 303/456 (66%), Gaps = 31/456 (7%)
Strand=Plus/Plus
Query 21422 TCTTGTATTCGCCGACCCGTCTTTCAAAGAAATTTGTTTTTCCTTCTAGTGCAATGTTTT 21481
||| ||| || ||||| || | || ||||| || || || || || | ||||| |
Sbjct 2859437 TCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGACAGCGAGATGTTGT 2859496
Query 21482 TCATAAAATTAAAAGGATTGCTGGCGTAAAAACACCTTTCTTCGTT--CAATT-CCACGC 21538
||| || | || |||||| |||||| | || ||||| ||| ||| |||||
Sbjct 2859497 CCATGAAGTCGAAGGGATTGGTGGCGTTGTAGTAC--TTCTT-GTTGCCAAGAGCCACGA 2859553
Query 21539 ACAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTCATGCCCAACA 21598
| || || || ||||| || ||||| || |||||| | | |||||||| | ||
Sbjct 2859554 GAAGTCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCA 2859613
Query 21599 GATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTCCTTGATCA 21658
| | ||| || || || || || | ||||||| |||||| || || || || |||| |
Sbjct 2859614 GGTTGACGGGCAGAGCATCCGTCAGGAACTCCTGCTCGATCGCGACGGCGTCGGTGATGA 2859673
Query 21659 TGGCGTGTATTTCACCGGCGGACAATTTGTCTTG--AGGCTCGATGTATTTGTTGTAGTA 21716
|| ||| ||||||| | |||| ||| || || ||| || | |
Sbjct 2859674 TG--------TTCT-----GGACAATCTC-CTTGCTAGGG-CGGTGG--TTGAGGTGGGA 2859716
Query 21717 GA------GACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCT 21770
|| |||||||||| | |||||||| ||||| || || || |||| ||||||
Sbjct 2859717 GAACAGCAGACAAGCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGA 2859776
Query 21771 GAACGTGAGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACC 21830
||| |||||||| ||||| | ||| || || || | | || || | |||||| ||
Sbjct 2859777 GAAGGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCC 2859836
Query 21831 GGaaaaaaaCACGCCCTCCACAATGGCGAACGCCAC 21866
||| || || | |||||||||| |||||| || ||
Sbjct 2859837 GGAGAAGAAGATGCCCTCCACAGCGGCGAAGGCAAC 2859872
>seq3
Length=4355815
Score = 96.9 bits (106), Expect = 4e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || ||||||||||||| | ||| | || |||||||| || || || || |
Sbjct 2043491 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 2043550
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
| | ||||||||| || || || || || || || || ||||| || ||||| ||
Sbjct 2043551 TAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT 2043610
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | |||||| ||| || |||||||| |||||||| ||||| || | || || ||||
Sbjct 2043611 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2043670
Query 134704 A 134704
|
Sbjct 2043671 A 2043671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398191523160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |