Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 seq3 96.9 4e-15 >seq2 Length=4789688 Score = 111 bits (122), Expect = 2e-19 Identities = 303/456 (66%), Gaps = 31/456 (7%) Strand=Plus/Plus Query 21422 TCTTGTATTCGCCGACCCGTCTTTCAAAGAAATTTGTTTTTCCTTCTAGTGCAATGTTTT 21481 ||| ||| || ||||| || | || ||||| || || || || || | ||||| | Sbjct 2859437 TCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGACAGCGAGATGTTGT 2859496 Query 21482 TCATAAAATTAAAAGGATTGCTGGCGTAAAAACACCTTTCTTCGTT--CAATT-CCACGC 21538 ||| || | || |||||| |||||| | || ||||| ||| ||| ||||| Sbjct 2859497 CCATGAAGTCGAAGGGATTGGTGGCGTTGTAGTAC--TTCTT-GTTGCCAAGAGCCACGA 2859553 Query 21539 ACAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTCATGCCCAACA 21598 | || || || ||||| || ||||| || |||||| | | |||||||| | || Sbjct 2859554 GAAGTCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCA 2859613 Query 21599 GATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTCCTTGATCA 21658 | | ||| || || || || || | ||||||| |||||| || || || || |||| | Sbjct 2859614 GGTTGACGGGCAGAGCATCCGTCAGGAACTCCTGCTCGATCGCGACGGCGTCGGTGATGA 2859673 Query 21659 TGGCGTGTATTTCACCGGCGGACAATTTGTCTTG--AGGCTCGATGTATTTGTTGTAGTA 21716 || ||| ||||||| | |||| ||| || || ||| || | | Sbjct 2859674 TG--------TTCT-----GGACAATCTC-CTTGCTAGGG-CGGTGG--TTGAGGTGGGA 2859716 Query 21717 GA------GACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCT 21770 || |||||||||| | |||||||| ||||| || || || |||| |||||| Sbjct 2859717 GAACAGCAGACAAGCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGA 2859776 Query 21771 GAACGTGAGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACC 21830 ||| |||||||| ||||| | ||| || || || | | || || | |||||| || Sbjct 2859777 GAAGGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCC 2859836 Query 21831 GGaaaaaaaCACGCCCTCCACAATGGCGAACGCCAC 21866 ||| || || | |||||||||| |||||| || || Sbjct 2859837 GGAGAAGAAGATGCCCTCCACAGCGGCGAAGGCAAC 2859872 >seq3 Length=4355815 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || ||||||||||||| | ||| | || |||||||| || || || || | Sbjct 2043491 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 2043550 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 | | ||||||||| || || || || || || || || ||||| || ||||| || Sbjct 2043551 TAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT 2043610 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | |||||| ||| || |||||||| |||||||| ||||| || | || || |||| Sbjct 2043611 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2043670 Query 134704 A 134704 | Sbjct 2043671 A 2043671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398191523160