Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 170 3e-37
seq2 111 2e-19
>seq1
Length=6618042
Score = 170 bits (188), Expect = 3e-37
Identities = 418/629 (66%), Gaps = 5/629 (1%)
Strand=Plus/Plus
Query 69501 TTGTG-TATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCAT 69559
||||| || | |||| ||||| || || || | |||||| | | |||||| || |
Sbjct 2615596 TTGTGGTAAAGAGCC--TCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGT 2615653
Query 69560 TTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAA 69619
| || || | || || ||| || | | ||| || || ||||| || || || |||
Sbjct 2615654 TGGGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAG 2615713
Query 69620 TCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAA 69679
|||| ||||| |||||||| | | |||| |||||| || || || || ||
Sbjct 2615714 TCCAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAA 2615773
Query 69680 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCG 69739
|||| | || || | |||||||| ||||| || || || || || || | | || |
Sbjct 2615774 GATCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAG 2615833
Query 69740 GTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCG 69799
| || || ||||||||||| || | ||||||||||||||| || |||| | ||||| |
Sbjct 2615834 GGCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGG 2615893
Query 69800 GAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATAT 69859
| | ||| || || || ||||| || ||||| || || || | ||||| |||
Sbjct 2615894 GGACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATAC 2615953
Query 69860 TACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATG 69919
|| ||||| || || || || | || ||||| || |||||| || | |
Sbjct 2615954 GGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAG 2616013
Query 69920 TGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTT 69979
|||| || |||||||| ||||| || || |||||| | || || ||| | | |
Sbjct 2616014 TGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCT 2616073
Query 69980 GATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAG 70039
| | || ||| || || || || | || ||||| || |||||||| | || | |
Sbjct 2616074 GCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGG 2616133
Query 70040 AAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCG 70098
| | ||| ||||| || ||||| | || || || ||| | || ||||| | ||
Sbjct 2616134 ACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCG-TGGATTCCAACAGCA 2616192
Query 70099 ACACGCATCAACATATGCTGAGGTCGTTC 70127
|||||||| | ||| ||||| || |||||
Sbjct 2616193 ACACGCATAATCATGTGCTGGGGACGTTC 2616221
>seq2
Length=4789688
Score = 111 bits (122), Expect = 2e-19
Identities = 294/448 (66%), Gaps = 16/448 (4%)
Strand=Plus/Plus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|| ||||| ||||| || || |||||||| || || || ||||| || || || ||
Sbjct 2859436 TTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGACAGCGAGATGTTG 2859495
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
|||||||| || || ||||| || || || || | || || || | | |
Sbjct 2859496 TCCATGAAGTCGAAGGGATTGGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGCCACGAGA 2859555
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| || || || || || || ||||| ||| | | ||||| || | ||
Sbjct 2859556 AGTCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGG 2859615
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|| || || ||||| ||||| || ||||| | ||||| | ||||| || || ||
Sbjct 2859616 TTGACGGGCAGAGCATCCGTCAGGAACTCCTGCTCGATCGCGACGGCGTCGGTGAT---- 2859671
Query 39566 GATGTT----ACTACCTCATCACT----CGGTGGATGCAATAAATGTTTAAACATTAAGC 39617
|||||| || | ||| | || |||||| || | || |||| | |
Sbjct 2859672 GATGTTCTGGACAATCTCCTTGCTAGGGCGGTGGTTG----AGGTGGGAGAACAGCAGAC 2859727
Query 39618 AGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTC 39677
| || ||||| || || |||||||| | | || | ||||| || || ||||| |
Sbjct 2859728 AAGCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGAC 2859787
Query 39678 CAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGA 39737
||||||| ||||||||||| || ||||| || || | |||||| || || || |||||||
Sbjct 2859788 CAGGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGA 2859847
Query 39738 TGCCTTCTACTGCTGCAAATGCAACAAG 39765
|||| || || || || || ||||| ||
Sbjct 2859848 TGCCCTCCACAGCGGCGAAGGCAACGAG 2859875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908516650120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |