Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 2e-32
seq2 109 7e-19
>seq1
Length=6618042
Score = 154 bits (170), Expect = 2e-32
Identities = 411/624 (66%), Gaps = 12/624 (2%)
Strand=Plus/Plus
Query 111468 TTGTG-TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 111526
||||| || || || || |||||||| || | | || | ||| || || |||| ||
Sbjct 2615596 TTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTG 2615655
Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586
|| ||||| || | ||| | ||| |||| || ||||||||||| ||||| ||| ||
Sbjct 2615656 GGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTC 2615715
Query 111587 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 111646
|| || | | |||||||| | | | | | ||||| | || ||||| || |
Sbjct 2615716 CAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGA 2615775
Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 111706
|| | ||| || | |||||| | |||||| ||||| || |||| |||| || ||
Sbjct 2615776 TCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACC---A 2615832
Query 111707 CGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760
| ||| || | || | || || | || ||| ||| || || || |||||
Sbjct 2615833 GGGCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATG 2615892
Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 111820
|| | ||| || | || ||||| || || || || |||| | | |
Sbjct 2615893 GGGACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATA 2615952
Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880
||||||| | |||||||| ||||| ||||||||| ||||||| | | |||
Sbjct 2615953 CGGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGA 2616012
Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940
|| | || ||||| | || ||| ||||| || ||| |||||||| || | |
Sbjct 2616013 GTGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGC 2616072
Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TG 111999
||||| || ||||| || ||||| |||||||| | || ||| |||| ||| | ||
Sbjct 2616073 TGCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAA-GTACTTCTG 2616131
Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059
||||||| || ||| ||||| | ||| |||||||| || |||||||| || | ||
Sbjct 2616132 GGACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGATTCCAACAGC 2616191
Query 112060 GACCCGCATGAACATGTACTGTGG 112083
|| ||||| | ||||| ||| ||
Sbjct 2616192 AACACGCATAATCATGTGCTGGGG 2616215
Score = 105 bits (116), Expect = 8e-18
Identities = 130/178 (73%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301
|| ||||| ||||| ||||| ||| || | | ||||| | ||| || || ||
Sbjct 2615320 GAGGCCAAGTTGCAGACAGCAACCTCGTCAGGGGCGCTATACTCGATAATCTCAGTGCAG 2615379
Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361
| |||||| || || || |||| ||||| ||||| |||||| ||||||| ||||||
Sbjct 2615380 AGGTTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAAGCATCC 2615439
Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA 111419
||||| |||||| | || || || ||||||||||| | | |||||| || | |||||
Sbjct 2615440 TTGTACAGCATGAATGGGGTTCCGGTCTCCGTCTGCGCCTCGAGAATGGCGTACCAAA 2615497
>seq2
Length=4789688
Score = 109 bits (120), Expect = 7e-19
Identities = 152/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| ||||||||||| || || || || || || |||||| |||||
Sbjct 2859730 GCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCA 2859789
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777
||||| ||||| |||||||||| ||| | || | ||| || || ||||||||||||||
Sbjct 2859790 GGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCA-AAGGAGCCGGAGAAGAAGAT 2859848
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAA 122836
||||||||| || || |||| || || | || |||| | || | ||| | | ||
Sbjct 2859849 GCCCTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGGTG-GACTCCTTGTCCTGAA 2859907
Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTT 122864
||| || || ||||| | ||||||||
Sbjct 2859908 TCCACTTGATGGCCCACTCAGCCTTCTT 2859935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031740936800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |