Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 179 5e-40
seq2 161 1e-34
>seq1
Length=6618042
Score = 179 bits (198), Expect = 5e-40
Identities = 420/626 (67%), Gaps = 16/626 (3%)
Strand=Plus/Plus
Query 118942 TTGTG-TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT 119000
||||| || || || || ||||| || || | || | ||| || || |||| |
Sbjct 2615596 TTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTG 2615655
Query 119001 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 119060
|||||||| || | ||| | ||| | |||| || ||||||||||||||||| || ||
Sbjct 2615656 GGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTC 2615715
Query 119061 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 119120
||||| || |||||||||| ||| | | ||||||| | || || || || |
Sbjct 2615716 CAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGA 2615775
Query 119121 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTA 119180
||||| ||||| | |||||| | |||||| || |||||||| | |||| | || |
Sbjct 2615776 TCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACC---A 2615832
Query 119181 CGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234
| || || |||||| || || || |||||| ||| || || || |||||
Sbjct 2615833 GGGCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATG 2615892
Query 119235 GGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGA 119292
|| | || || | ||| ||||| || || || || ||| | |||| | ||
Sbjct 2615893 GGGACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCC--GGTGGCGCGGA 2615950
Query 119293 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 119352
| |||||||| | ||||||||| || || ||||||||| |||| || | |||
Sbjct 2615951 TACGGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGA 2616010
Query 119353 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 119412
|| || |||| || || || || ||| |||| | ||| |||||||||| | |
Sbjct 2616011 GAGTGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGA 2616070
Query 119413 TTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT- 119471
|| ||| || ||||| |||||||| || ||||| | || || |||| ||| |
Sbjct 2616071 GCTGCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAA-GTACTTC 2616129
Query 119472 TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 119531
||||||||| || ||| ||||| | ||| |||||| || ||||| || || |
Sbjct 2616130 TGGGACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGATTCCAACA 2616189
Query 119532 GAGACCCGCATAAACATGTATTGGGG 119557
| || ||||||| ||||| |||||
Sbjct 2616190 GCAACACGCATAATCATGTGCTGGGG 2616215
Score = 95.1 bits (104), Expect = 1e-14
Identities = 276/413 (67%), Gaps = 19/413 (5%)
Strand=Plus/Minus
Query 14065 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 14124
|||||| ||||| || || | || || | |||||| | ||| | |||||| | ||
Sbjct 699631 ATCAAACCGACCGGGTCGCATCAGAGCCTTGTCAAGAACATCTGGTCTGTTCGTTCCAGC 699572
Query 14125 GATGACAACGA--TGCCC-GTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATT 14181
|| ||| |||| ||| | | | ||| ||||| ||||||||||| | || || ||
Sbjct 699571 GAGGACCACGACTTGCTCAGACGTGTTG---AAGCCGTCCATCTCAGTGAGGATCTGGTT 699515
Query 14182 GATGGTTTGTTCGCGTTCATCATT--CGCAGGCATACCACCC----GCACTGCGTTGCTT 14235
| || || || || || || ||| | || | | | || || || | ||
Sbjct 699514 CAGTGTACTCTCCCGCTCGTCGTTACCGCCGCCAAAACTCTGTTTAGCTCT-CGAT--TT 699458
Query 14236 ACCGACGGCGTCAATTTCATCGATGAAAACGATACATGG-TTGATTTTCACGGGCAACTT 14294
||||| |||||| |||||||||||||| | ||||| || || | ||| |||||
Sbjct 699457 ACCGATGGCGTCGATTTCATCGATGAATATAATACAGGGAGTGTTCTTC-CGGGCGTTGG 699399
Query 14295 CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGG 14354
| || | ||| || || | | | ||||||||| || |||||||| || || | || |
Sbjct 699398 CGAACAGATCACGGACACGCGATGGACCGACACCGACGAACATCTCAACGAATTCGGAGC 699339
Query 14355 CG-GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 14413
|| ||| | || |||||| || |||||||| || | || ||||| || |||
Sbjct 699338 CGCTGACACT-GAAGAAGGGAACTCCGGATTCACCAGCCGTTGCCTTTGCGAGCAGAGTC 699280
Query 14414 TTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
|| || || || || ||||| ||||| ||||| || || ||| |||||||
Sbjct 699279 TTACCGGTACCCGGAGGCCCTGAGAGAATAGCACCGCGGGGAATCTTGGCACC 699227
Score = 89.7 bits (98), Expect = 6e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814
||||| ||||| || ||||| | ||| || || || || |||| |||||| || ||
Sbjct 2615359 TACTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTG 2615418
Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874
||| |||| || ||||||||||| |||||| |||| || || |||||||| || | |
Sbjct 2615419 CTCTTCCTGTTGCAAGCATCCTTGTACAGCATGAATGGGGTTCCGGTCTCCGTCTGCGCC 2615478
Query 118875 TTGAGAATAGCCTTCCA 118891
| |||||| || | |||
Sbjct 2615479 TCGAGAATGGCGTACCA 2615495
>seq2
Length=4789688
Score = 161 bits (178), Expect = 1e-34
Identities = 163/209 (78%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| |||||||| ||||| ||||| || || || |||||| |||||
Sbjct 2859730 GCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCA 2859789
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||| ||||| |||||||||| |||||| |||| | ||| ||||| |||||||||||
Sbjct 2859790 GGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGATG 2859849
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGT-ATCA 130192
||||||||| ||||| |||| |||||||| |||||||| ||||| |||| | |
Sbjct 2859850 CCCTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGG---TGGACTCCTTGTCCTGA 2859906
Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTT 130221
| |||||| || ||||||| ||||| ||
Sbjct 2859907 ATCCACTTGATGGCCCACTCAGCCTTCTT 2859935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434944895480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |