Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 2e-32
seq2 147 3e-30
seq4 87.8 2e-12
>seq1
Length=6618042
Score = 154 bits (170), Expect = 2e-32
Identities = 411/624 (66%), Gaps = 12/624 (2%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| | ||||| || || | || || || || || |||||||| |||
Sbjct 2616215 CCCCAGCACATGATTATGCGTGTTGCTGTTGGAATCCACGGTGATGACATTGAGAAGGTC 2616156
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || ||||||||| | ||| |||| ||| || | |||||||| ||
Sbjct 2616155 ATTGAGACGTACAACCTGATGTCCCAGAAGTAC-TTCACTCATGCTTCTCCAACCCTGTT 2616097
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| || ||||| || || || | || |||||||| ||| || ||||| ||
Sbjct 2616096 CAACGCCGGTACTCCTCAGCCGCAGCTCGCCTCCTGCTTCCTCGTCGACATGAAGGAAGA 2616037
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | ||||| || | ||||| | | ||||||| ||||||||| |||||
Sbjct 2616036 CAGCATTGAGGGTATTTACGACACTCTCAAGACTTGTGCGCTGATCTCAAAGACCGCTGG 2615977
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|||||||| | ||||||| | | | |||| || || || || ||
Sbjct 2615976 TGGTATTGGTCTCAACATCCACCGTATCCGCGCCACCGGCTCCTACATCTCTGGTACCAA 2615917
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| || | || ||| | || ||||| || || || ||| ||| || | || ||
Sbjct 2615916 TGGATCTTCCAACGGAATTGTCCCCATGCTCCGGGTCTTCAACAACACTGCCAGATACGT 2615857
Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
| || | || ||| | || || |||| |||| || ||||| |||||
Sbjct 2615856 CGACCAGGGAGGAAACAAGCGCCCT---GGTGCTTTCGCTATCTACCTGGAGCCTTGGCA 2615800
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
| | |||||| | || ||| | || | || ||||| || | || || | |
Sbjct 2615799 CTCTGATATCTTCGACTTCTTGGATCTTCGCAAGAACCACGGCAAGGAAGAAGTTAGAGC 2615740
Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
|| |||||||||| ||||||||||| ||| || |||||||||||| | || |||| ||
Sbjct 2615739 TCGTGATCTCTTCTACGCTCTCTGGACTCCGGACCTCTTCATGAAGCGTGTCGAGGCGAA 2615680
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814
|| | ||| | || || || || || |||| ||||| ||| | |||| || ||
Sbjct 2615679 CGGTGACTGGACACTGTTCTGCCCCAACGAGGCTCCTGGCCTCGCTGATGTGTACGGCGA 2615620
Query 104815 GGAGTTTGAAGCCCTTTA-CACAA 104837
|||||| || || ||||| |||||
Sbjct 2615619 GGAGTTCGAGGCTCTTTACCACAA 2615596
>seq2
Length=4789688
Score = 147 bits (162), Expect = 3e-30
Identities = 172/227 (76%), Gaps = 8/227 (4%)
Strand=Plus/Minus
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGT 94789
||||||| || || | ||||| || || ||||| || |||||| || | |||| |||
Sbjct 2859952 CAGTTCCTTGCATCCGCAAGAAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGAGT 2859893
Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
| |||||||| |||| ||| | || || || ||| ||||| ||||||||||| |
Sbjct 2859892 CCA---CCTTTGCTCAGCGTCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCG 2859836
Query 94850 GTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 94908
| ||||| ||| | || | ||||| |||||||| ||||| ||||| |||||| ||||
Sbjct 2859835 GCTCCTT-TGCTTCGATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTC 2859777
Query 94909 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||||||||| ||||||||||| ||||| || ||| || |||||
Sbjct 2859776 TCCAACGAGCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTTGC 2859730
>seq4
Length=3953819
Score = 87.8 bits (96), Expect = 2e-12
Identities = 188/281 (67%), Gaps = 0/281 (0%)
Strand=Plus/Plus
Query 169172 CCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCGA 169231
|||||||||||| || |||| ||| ||| ||||||||||| ||| |||| |||||
Sbjct 3098124 CCCTTGATGTGGCTTCCATCGTGATCCTGATCGGTCATGATCATAAGATGACCGTACCGC 3098183
Query 169232 AGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCG 169291
|| | ||| ||| ||||| || |||||||| | || ||||||| ||
Sbjct 3098184 AGACCTTTGGTATCGGTATATTCCTTCTTATGCTGAAGACCAAGGAAGTTCTTGATATTC 3098243
Query 169292 TTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACACTTC 169351
| || |||||||| | || || || ||||||||| ||||| || |||
Sbjct 3098244 TGGATTTCTTGGTTCTTGGAGATTTGATCGATAGAGGCATCACGAACGTTGAGCAGCTTT 3098303
Query 169352 CCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGACTGCG 169411
|| || | ||| ||||||||| | ||||| | || || || | || || | |||
Sbjct 3098304 CCTCGTAAAGGAAAGACACCGAACAGATCAGGTCCGACCACTGCTCTCCCTGCCATTGCC 3098363
Query 169412 AGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452
| | || || || ||||| || |||| |||||| || ||
Sbjct 3098364 AAACCTTTGGCTGAATCACCTTCTGTGAGGATGAGGGTGCA 3098404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260559404920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |