Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq3 206 8e-48
seq7 161 3e-34
seq5 98.7 3e-15
>seq3
Length=4355815
Score = 206 bits (228), Expect = 8e-48
Identities = 921/1451 (63%), Gaps = 17/1451 (1%)
Strand=Plus/Minus
Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256
|||| || || |||||| | ||||| || || ||||| || | ||| | | |||| |
Sbjct 1578680 CCGCGATCGGTATCGATCTGGGTACCACGTACTCTTGCGTGGGTGTCTTCAGAGATGACC 1578621
Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316
|| | ||||| ||||| || || || |||||| | || || || || | |||||| || |
Sbjct 1578620 GTATCGAAATCATTGCCAACGACCAGGGTAACCGGACGACCCCGTCGTTCGTTGCCTTCA 1578561
Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376
|||| || |||||| |||| |||||| |||| || || || | ||| || || | |
Sbjct 1578560 CCGACACCGAGCGTCTGATCGGTGATGCTGCTAAGAACCAGGTTGCCATGAACCCCAGCA 1578501
Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---C 349433
| || || || || |||||||| || || || | | || | ||| ||| |
Sbjct 1578500 ACACTGTGTTCGACGCTAAGCGTCTCATCGGACGCAAGTTCACCGAC---TCTGAGGTCC 1578444
Query 349434 AATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTA 349493
| | || | || || || || || | || || | | |||| || || || || |
Sbjct 1578443 AGGCCGACATGAAGCACTTCCCATTCAAGGTCGT-CGAGAAGAA--TGGCAAGCCCATCA 1578387
Query 349494 TTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGG 349553
| ||||| | | || || || || || || ||||| ||||| || || ||||
Sbjct 1578386 TCGAGGTCCAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAAATCTCCTCCATGG 1578327
Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613
| | || ||| || | || || | || | |||| || || | | ||||
Sbjct 1578326 TCCTGACCAAGATGCGTGAGACCGCCGAGTCTTACCTTGGTGGCACCGTCAACAACGCTG 1578267
Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673
| || ||||| || || || || || || |||||||| || || || || || ||
Sbjct 1578266 TCATCACTGTCCCCGCTTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGACGCCGGTC 1578207
Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733
|||||| || | || ||||| | || || || || |||||||| || || || || |
Sbjct 1578206 TCATTGCCGGTCTGAACGTTCTGCGTATCATCAACGAGCCCACTGCAGCCGCTATCGCCT 1578147
Query 349734 ATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTG 349793
| || ||||| || | | ||| || || | || || || || | |||||||
Sbjct 1578146 ACGGTCTTGACAAGAAGGCTGAGGGTGAGCGCAACGTCCTGATCTTCGACCTGGGTGGTG 1578087
Query 349794 GTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTG 349853
|||| || ||||| || || || || |||| ||||| || || || || || | ||||
Sbjct 1578086 GTACCTTCGATGTCTCCCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCTACTG 1578027
Query 349854 CTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTA 349913
||||||| || || || ||||| || || || || || || ||||| || || || |
Sbjct 1578026 CTGGTGACACCCACCTGGGTGGTGAGGACTTCGACAACCGCCTCGTCAACCACTTCGTCA 1577967
Query 349914 AAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGC 349972
| || || ||||| ||||| || | || | || || | || | || ||
Sbjct 1577966 ACGAGTTCAAGCG-CAAGCACAAGAAGGACCTGACCACCAACGCTCGTGCTCTCCGCCGT 1577908
Query 349973 CTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATT 350032
|| | ||||| ||||| ||||| ||||| || | || || || | || ||||| ||
Sbjct 1577907 CTCCGCACTGCTTGTGAGCGTGCCAAGCGCACCCTCTCTTCCTCTGCTCAGACCTCCATC 1577848
Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092
|| || || || || || |||| || |||| | || || || |||||||| ||
Sbjct 1577847 GAGATCGACTCCCTCTTCGAGGGCATTGACTTCTACACCTCCATCACCCGTGCTCGTTTC 1577788
Query 350093 GAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAA 350152
|| || | || ||| || || | | || ||||| || || || || |
Sbjct 1577787 GAGGAGCTCTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGAGCGTGTCCTCCGT 1577728
Query 350153 GATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212
|| || || || ||| | | | || | || | || |||||||| || |||
Sbjct 1577727 GACGCCAAGATTGACAAGGCTTCCGTCCACGAGATCGTCCTTGTCGGTGGTTCCACCCGT 1577668
Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA 350272
|| || || | || | | | ||| || || || ||| || || | ||
Sbjct 1577667 ATCCCCAAGATCCAGCGCCTCGTTGGTGACTTCTTCAA---CAAGGAGCCCAACAAGTCC 1577611
Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332
|| || || ||||| |||||||| || |||||||| || ||||| | || | |||||
Sbjct 1577610 ATCAACCCCGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATCCTGTCTGGT 1577551
Query 350333 AATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTT 350389
| | ||| || | | || | | || || ||||| | || || || |
Sbjct 1577550 GACACCTCTTCCAAGTCCACCAACGAGATCCTGCTGCTCGATGTCGCCCCTCTCTCTGTC 1577491
Query 350390 GGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCT 350449
|| | || || |||||| || |||||| |||||| | || | || | ||
Sbjct 1577490 GGTATCGAGACCGCTGGTGGTGTCATGACTCCTCTTATCAAGCGTAACACCACCATCCCC 1577431
Query 350450 ACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAA 350509
|| || ||||| | || || ||||| | | || || ||||| | || || ||
Sbjct 1577430 ACCAAGAAGTCTGAGACCTTCTCTACCTACTCCGACAACCAGCCCGGTGTGCTCATCCAG 1577371
Query 350510 GTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTA 350569
|| | || ||||| |||||||| || || || || || || || |||| ||
Sbjct 1577370 GTCTACGAGGGTGAGCGTGCTCGTACCAAGGACAACAACCTCCTCGGCAAATTCGAGCTT 1577311
Query 350570 AGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGAT 350629
| || ||||| || ||| | || ||||||||||| || ||| | |||||| |||||
Sbjct 1577310 ACTGGCATTCCTCCTGCTCCTCGTGGTGTTCCTCAGATCGAGGTCACCTTCGATGTTGAT 1577251
Query 350630 TCAAATGGTAT 350640
| || |||||
Sbjct 1577250 GCCAACGGTAT 1577240
>seq7
Length=1958609
Score = 161 bits (178), Expect = 3e-34
Identities = 175/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| || ||||| | | || ||||| || || |||||||| || |||||||| || ||
Sbjct 430706 CATTCCTCCACGCAGGCGGAGGACAAGGTGCAGTGTAGACTCCTTCTGAATATTGTAGTC 430765
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| || || || ||||| || || || || ||||| ||||| ||||| ||||| || ||
Sbjct 430766 TGACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCCGG 430825
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || || || ||||| ||||| | || || ||||| || | ||| || | |||
Sbjct 430826 GGGAATACCCTCCTTGTCCTGGATTTTCGACTTCACGTTATCGATGGTATCTGACGATTC 430885
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
||||| || |||| ||||||||||| || || || || ||||||||||||
Sbjct 430886 GACTTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCATT 430937
Score = 113 bits (124), Expect = 1e-19
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 140509 TACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAG 140568
|||||||||| | ||| ||||| || || ||||| ||| || || ||||| || || |
Sbjct 430480 TACCACCACGGAGTCTGAGAACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGG 430539
Query 140569 ATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAG 140628
| | || || || || ||||| || || || || ||||| | || ||||| || || |
Sbjct 430540 AGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTG 430599
Query 140629 GAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTTCA 140687
| || || || || ||||| || || ||| || || || || || | ||||| ||
Sbjct 430600 GGATACCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATTGTGTCAGAGCTCTCG 430658
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || || |||| ||||||||||| || || || || || |||||||||
Sbjct 430659 ACCTCCAGCGTAATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCATT 430709
>seq5
Length=3167764
Score = 98.7 bits (108), Expect = 3e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 378231 AATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCAT 378290
|||||||||||| | || || |||||||| ||||| | ||| |||||||| ||||
Sbjct 1278574 AATATAACCAGTCTCTGCGGTCTTCACTGCAGTGTCAATGAGACCCTCACGACCAGCCAT 1278515
Query 378291 TGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCC 378350
|| |||||||| ||||| ||||| || || |||| | | | || | |||| ||| ||
Sbjct 1278514 AGCGTGGAAGAAGAATTCGGTAGGCGTCAGACCACGGAGATACGAGTTTTCAACAAAGCC 1278455
Query 378351 TCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCC 378410
| | |||| || | |||| ||||| ||||||| || || || | || || ||
Sbjct 1278454 ACGAGACTCTGGAGAGTAGTCATCCTTTGTGAAATGAGGCAAGGTGCGGTACTTGAAGCC 1278395
Query 378411 ATATGGAATTCGTTTTCCATCAAC 378434
| ||||| || || || |||||
Sbjct 1278394 GAAAGGAATACGCTTGCCCTCAAC 1278371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253759331499
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |