Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 244 1e-59
seq2 123 3e-23
>seq1
Length=6618042
Score = 244 bits (270), Expect = 1e-59
Identities = 407/588 (69%), Gaps = 0/588 (0%)
Strand=Plus/Minus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177
||||| || || || || ||||| || || ||| | | ||| ||||| ||| ||
Sbjct 2616200 ATGCGTGTTGCTGTTGGAATCCACGGTGATGACATTGAGAAGGTCATTGAGACGTACAAC 2616141
Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237
|||||| |||||||| |||||| || || | || ||||| ||||||||||||||
Sbjct 2616140 CTGATGTCCCAGAAGTACTTCACTCATGCTTCTCCAACCCTGTTCAACGCCGGTACTCCT 2616081
Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297
| |||||| | | ||| ||||| || | |||||||| |||||||||||||| ||
Sbjct 2616080 CAGCCGCAGCTCGCCTCCTGCTTCCTCGTCGACATGAAGGAAGACAGCATTGAGGGTATT 2616021
Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357
||||| || |||||| || |||| ||||| ||| | || ||||| || || ||
Sbjct 2616020 TACGACACTCTCAAGACTTGTGCGCTGATCTCAAAGACCGCTGGTGGTATTGGTCTCAAC 2615961
Query 19358 TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGT 19417
| |||||| | | || | ||| ||| || || ||| || ||||
Sbjct 2615960 ATCCACCGTATCCGCGCCACCGGCTCCTACATCTCTGGTACCAATGGATCTTCCAACGGA 2615901
Query 19418 ATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGC 19477
|| ||||| |||||||| |||||||||||||| ||||| |||||| ||||||| || |
Sbjct 2615900 ATTGTCCCCATGCTCCGGGTCTTCAACAACACTGCCAGATACGTCGACCAGGGAGGAAAC 2615841
Query 19478 AAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTC 19537
|| ||| || | ||||| |||||||| ||||| |||||| | || || | || |||
Sbjct 2615840 AAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCTTGGCACTCTGATATCTTCGACTTC 2615781
Query 19538 CTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCC 19597
| || || ||| |||||| || | || || | | ||| || |||||| ||
Sbjct 2615780 TTGGATCTTCGCAAGAACCACGGCAAGGAAGAAGTTAGAGCTCGTGATCTCTTCTACGCT 2615721
Query 19598 TTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATG 19657
| |||| ||||||||| |||||| || || ||| | ||| || ||| ||| |
Sbjct 2615720 CTCTGGACTCCGGACCTCTTCATGAAGCGTGTCGAGGCGAACGGTGACTGGACACTGTTC 2615661
Query 19658 TGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTC 19705
||||| |||| |||||||| | || || |||||||||| ||||
Sbjct 2615660 TGCCCCAACGAGGCTCCTGGCCTCGCTGATGTGTACGGCGAGGAGTTC 2615613
Score = 230 bits (254), Expect = 3e-55
Identities = 412/600 (69%), Gaps = 4/600 (1%)
Strand=Plus/Plus
Query 79304 CCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCT 79363
|||| || || ||||| | ||||| || ||||| ||||| | ||| ||||||
Sbjct 2615618 CCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTGGGGCAGAACAGTGTCCAGTCAC 2615677
Query 79364 CGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGC 79423
||| | ||| || || ||||||||||||||| |||| || || |||||| || |
Sbjct 2615678 CGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTCCAGAGAGCGTAGAAGAGATCAC 2615737
Query 79424 GGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGG 79483
| | | || || | ||| |||||| || || || | ||||| | ||| || |
Sbjct 2615738 GAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGATCCAAGAAGTCGAAGATATCAG 2615797
Query 79484 CGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGA 79543
|||||| |||||||| ||||| ||||| | ||| ||||||| || ||||||| ||
Sbjct 2615798 AGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTTCCTCCCTGGTCGA 2615857
Query 79544 CGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGT 79603
|||| | ||| ||||||||||| || ||||||||||| || || |||| || || |
Sbjct 2615858 CGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGGACAATTCCGTTGGAAGATCCAT 2615917
Query 79604 TCGTCCCGTTGATTCGTGTACCGCTCGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCC 79661
| || || ||| | ||| | || || || | | || || || || || ||
Sbjct 2615918 TGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGGTGGA--TGTTGAGACCAATACC 2615975
Query 79662 CCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGA 79721
|| | ||| ||||| |||| || |||||| || ||||| || ||||| ||
Sbjct 2615976 ACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTGTCGTAAATACCCTCAATGCT 2616035
Query 79722 GTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTT 79781
||| |||||||| |||| ||||||||| | | ||| || | |||||||||||
Sbjct 2616036 GTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCTGCGGCTGAGGAGTACCGGCGTT 2616095
Query 79782 GAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTT 79841
||| ||||| || | || || |||||| |||| ||| |||||| | ||||||||| |
Sbjct 2616096 GAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGGACATCAGGTTGTACGTCTCAAT 2616155
Query 79842 GACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901
||| | | ||| || |||||||| || || || || ||||| | | || ||||||
Sbjct 2616156 GACCTTCTCAATGTCATCACCGTGGATTCCAACAGCAACACGCATAATCATGTGCTGGGG 2616215
Score = 161 bits (178), Expect = 1e-34
Identities = 680/1059 (64%), Gaps = 35/1059 (3%)
Strand=Plus/Plus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
||||||||||| ||||| |||||| ||||||| || | |||||| || | | ||||
Sbjct 2614447 TAGTACATGCCAGTCTTCAGACCCATCTTCCACCCAGCGAAGTGCATGCTGGTAATCTTG 2614506
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
||| | | || | || |||| |||||||| ||||| |||||||||||| |||||||
Sbjct 2614507 CCCATAGTAGGCTCCTTCATGTGAATGTTGAGAGACTGAGACTGGTCGATGAACGCACCA 2614566
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378
||||| || ||||| | | || |||| |||||||| | ||| ||| | |
Sbjct 2614567 CGGTCAGCAGCCATCTGAAGGATATGGCGCTGCGAGATCTCCCACACTGTCTTGTAGAGG 2614626
Query 78379 GCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGCTCGCACAAT-- 78434
||||| | ||| | |||||| | | ||| | | ||| || ||||
Sbjct 2614627 GCCTTGATGTCTGCAGGGATGT--TGGGAATGTTCTGAATAGAACCACCTTCGGCAATGA 2614684
Query 78435 TTC-ATTCTTAAT-TTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGGACCAGGTGC 78492
| | ||||| || ||| | |||| | | | ||||||| || |||
Sbjct 2614685 TACGGTTCTTCATGTTGTCAG-ACCAGAGGCCAAGGTCGACAAGATCCTTGAGCAGCCAG 2614743
Query 78493 CGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTAC 78552
|||| | | |||||||||||| || || || |||||||| | |||||
Sbjct 2614744 GGGTTGACAACTTGGAACTCGCCGGCAAGAACACGACGGGAATAGATGTTCGAGGTGTAG 2614803
Query 78553 GGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCG 78612
|||||||| || || || | |||||| ||| || || ||||| || ||
Sbjct 2614804 GGCTCGAAGCATTCATTAAAGCCGAGGATCTGACTGGTGCTCGCAGTGGGCATAGGAGCC 2614863
Query 78613 ACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAG------GCCGTCC 78666
|| || | || || | ||| ||| | |||||| |||| || | |||
Sbjct 2614864 ACGAGCAAGCTGTTGCGGACACCGTGCTTGGCGATCTCAGCCTTCAGCGAGCTCCAATCC 2614923
Query 78667 CAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGC 78726
|| | ||| | | | | |||||||||| || || || |||| ||| | |||
Sbjct 2614924 CAGAGGTCAGTGGGAGTCCTGTCCCACATGTCATACTGGAGAATTCCCTGGGAGACTGGC 2614983
Query 78727 GACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGG 78786
|| || | | ||||| || | || | || |||||| | ||| ||| || |||
Sbjct 2614984 GAGCCTTCATATGTCTCATACGTGCCATGCTGCTTGGCCAACTCGACCGACGCGGTGAGG 2615043
Query 78787 GCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCG 78846
|| ||||||| | || ||||||||| |||| |||| | |||| | ||||
Sbjct 2615044 GCACCGTGGTAGATAGTCTCGAAGATCTGAATGTTCAGCTGCCTAGCCTCAGGAGAGTCG 2615103
Query 78847 AACG--AAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCG 78904
|| | || || | ||| | ||| ||||||| || || | ||| || | ||| ||||
Sbjct 2615104 AATGGCAAGCGCAGTGCA--AGGAATGCATCGGCAAGACCATTGACACCAAGAGCAATCG 2615161
Query 78905 GTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC-GGGTAAAAGTTCCGATCGATG 78963
| |||||||| | ||||||||| |||| || | | ||||| |||| |||||||
Sbjct 2615162 GACGGTGGCGGAGGTTGCTCTTCTTGGCC-TCTGGAACAGGGTAGTAGTTGATATCGATG 2615220
Query 78964 ACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAA- 79022
| ||||| ||| || || |||| | || ||||||| || ||| | || ||| |
Sbjct 2615221 ATCTTGTTCAAGTTGCGAACGAGGACCTGGGTGACCTCGTGCAGCTTGCCAAAGTCATAC 2615280
Query 79023 -----ATGATTTCCTTTGATGAAAGTCGG-TAGGCACAGCGATGCCAGGTTGCACACGGC 79076
| | | | || ||| || || | ||| || || |||| |||||| || ||
Sbjct 2615281 TCGCCACGGGCAGCGTCGACGAAGGTAGGCAATGCA-AGAGAGGCCAAGTTGCAGACAGC 2615339
Query 79077 CGTCTCGTCCGG---GCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGAT 79133
|||||| || |||| | |||||| || || ||||| | || || |||
Sbjct 2615340 AACCTCGTCAGGGGCGCTATA---CTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGAT 2615396
Query 79134 GGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGG 79193
|| || | ||||||||||||||||||| ||| || || |||||||| |||| | ||
Sbjct 2615397 AGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAAGCATCCTTGTACAGCATGAATGG 2615456
Query 79194 CGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCA 79232
|| |||||||| ||| || ||||| | ||| |||
Sbjct 2615457 GGTTCCGGTCTCCGTCTGCGCCTCGAGAATGGCGTACCA 2615495
>seq2
Length=4789688
Score = 123 bits (136), Expect = 3e-23
Identities = 337/505 (67%), Gaps = 31/505 (6%)
Strand=Plus/Minus
Query 59931 AAAGCAGAATGGGCCATGCAGTGGATGA--GTCCTGGAG-CATCATTTGCACAACGTCTC 59987
|| || || |||||||| ||||||| | | |||| | | ||||| || ||||||
Sbjct 2859932 AAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGAGTCCACCTTTGCTCAGCGTCTC 2859873
Query 59988 ATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGG 60047
| || || || ||||| || ||||||||||| ||||| || | | || ||||||
Sbjct 2859872 GTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTTTGCTTCGATCTTCTGG 2859813
Query 60048 CTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGAC 60107
|| || |||||||| || ||||| || || | ||||||||||||||||| || || ||
Sbjct 2859812 CTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACGAGCTGATCTCTCGTGAT 2859753
Query 60108 GAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCC 60166
||||| || || || ||||| || | ||| | || |||| | | | ||||
Sbjct 2859752 GAGGGTCTGCACACCGACTTTGC-TTGTCTGCTGTTCTCCCACC---TCAACCACCGCCC 2859697
Query 60167 TTCCAAGGATATTCACAAGA--TTGTTCAGTG-GGC--TTGTGAAGTGGAGAGCGAGTTC 60221
| |||||| ||| | ||| | ||| | || | | || | ||| ||||||
Sbjct 2859696 TAGCAAGGAGATTGTCCAGAACATCATCACCGACGCCGTCGCGA--TCGAGCAGGAGTTC 2859639
Query 60222 ATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTAC 60281
| || || || || || ||| || | || ||| |||| ||| ||||||
Sbjct 2859638 CTGACGGATGCTCTGCCCGTCAACCTGCTTGGCATGAACGCCAAGCTCATGTGCCAGTAC 2859579
Query 60282 ATTCAGTTTGTCGCGGACCG---CCTCATGGCCCAGTTTGG-----AGAAGGACCAATTT 60333
|| |||| ||||| ||||| ||| |||| | |||| ||||| || |
Sbjct 2859578 ATCGAGTTCGTCGCTGACCGACTTCTCGTGGCTC---TTGGCAACAAGAAGTAC-----T 2859527
Query 60334 ACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACT 60393
|| || | || || ||||||| ||||| | ||||||| || || ||||||||||
Sbjct 2859526 ACAACGCCACCAATCCCTTCGACTTCATGGACAACATCTCGCTGTCCGGCAAGACCAACT 2859467
Query 60394 TCTTTGAGAAGCGGGTCGGGGATTA 60418
|||| |||||||| ||||| || ||
Sbjct 2859466 TCTTCGAGAAGCGTGTCGGTGACTA 2859442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524573733520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |