Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq7 168 8e-37
seq1 149 7e-31
seq3 138 1e-27
seq2 138 1e-27
>seq7
Length=1958609
Score = 168 bits (186), Expect = 8e-37
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || |||||||||||||| || || ||||| ||||| | || | ||| |
Sbjct 431152 GTCAAGACCCTCACCGGCAAGACTATCACCCTGGAGGTGGAGTCGAGCGACACCATCGAC 431093
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
|| | ||| | || || |||||||||||||| || || |||||||||||||| || ||
Sbjct 431092 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCCTGATC 431033
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| || || ||||| |||||||||| || ||||| | |||||||| |||| |||||
Sbjct 431032 TTCGCAGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGACTATAACATCCAGAAGGAG 430973
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||||| || || ||| ||||||| || ||||||
Sbjct 430972 AGCACTCTCCACCTTGTCCTGCGTCTGCGTGGTGGA 430937
Score = 165 bits (182), Expect = 9e-36
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || |||||||| || ||||| ||||| ||||| || || || || ||
Sbjct 430937 AATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATTACCCTCGAAGTCGAATCGTC 430878
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| ||| | || ||||| | ||||| |||||||||||||| ||||| || |||||
Sbjct 430877 AGATACCATCGATAACGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCGGACCA 430818
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || ||||||||||| || ||||||| || ||| | ||||||| ||
Sbjct 430817 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCAGACTACAA 430758
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| | || ||||| || || || || || ||| | || || || || |||
Sbjct 430757 TATTCAGAAGGAGTCTACACTGCACCTTGTCCTCCGCCTGCGTGGAGGA 430709
Score = 147 bits (162), Expect = 2e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|||||||||||||| || |||||||| ||||| | || | ||| | || | ||| |
Sbjct 431425 ACCGGCAAGACTATCACCCTTGAGGTGGAGTCGAGCGACACCATCGACAACGTCAAGTCC 431366
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| || || |||||||||||||| | || || || || |||
Sbjct 431365 AAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCTTGATCTTCGCGGGCAAG 431306
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||| | ||| || || | |||||||| |||| ||||| ||||| |||||
Sbjct 431305 CAGCTTGAGGACGGTCGCACGCTCTCCGACTATAACATCCAGAAGGAGTCCACCCTTCAC 431246
Query 27610 CTAGTCTTGCGTCTTCGCGGTGGA 27633
|| || | ||||| || ||||||
Sbjct 431245 CTGGTGCTTCGTCTCCGTGGTGGA 431222
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| || ||||| ||||| ||||| || ||||| |||
Sbjct 430709 AATGCAGATCTTCGTGAAGACTCTGACCGGAAAGACCATTACGCTGGAGGTCGAGAGCTC 430650
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | || | || ||||| || || |||||||||||||| || || ||||||||
Sbjct 430649 TGACACAATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCAGACCA 430590
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| | || || || || ||||| || ||||| | ||| || || | ||||| ||
Sbjct 430589 GCAGCGCTTGATCTTCGCGGGCAAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTACAA 430530
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||| ||||| |||||| || || || | | || || |||||
Sbjct 430529 TATCCAGAAGGAGAGCACTCTCCACCTGGTTCTCAGACTCCGTGGTGG 430482
>seq1
Length=6618042
Score = 149 bits (164), Expect = 7e-31
Identities = 799/1276 (63%), Gaps = 72/1276 (6%)
Strand=Plus/Plus
Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599
|||||||||| | ||| | || |||| || | || || || | | ||||| ||||
Sbjct 2614946 CCCACATGTCATACTGGAGAATTCCCTGGGAGACTGGCGAGCCTTCATATGTCTCATACG 2615005
Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659
||| | | |||||||| ||| |||| | | ||||| |||| || || ||| |
Sbjct 2615006 TGCCATGCTGCTTGGCCAACTCGACCGACGCGGTGAGGGCACCGTGGTAGATAGTCTCGA 2615065
Query 80660 AGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719
||| |||||| | |||| || |||||| | ||||| || | ||
Sbjct 2615066 AGATCTGAATGTTCAGCTGCCTAGCCTCAGGAGAGTCGAATGGCAAGCGCAGTGCAAGGA 2615125
Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-C 80778
| | || || || || | || || | || ||||| |||||||| ||| | || |
Sbjct 2615126 ATGCATCGGCAAGACCATTGACACCAAGAGCAATCGGACGGTGGCGGAGGTT-GCTCTTC 2615184
Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838
| |||||| |||| ||||| |||| ||||||||| ||||| |||||| |
Sbjct 2615185 TTGGCCTCTGGAACAGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTGCGAACGAGG 2615244
Query 80839 ACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCC-----CTTC-ACAAAT 80892
||| | || || || || || || |||||| | | | | | || || ||
Sbjct 2615245 ACCTGGGTGACCTCGTGCAGCTTGCCAAAGTCATACTCGCCACGGGCAGCGTCGACGAAG 2615304
Query 80893 GCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951
| || || || || || |||| ||||| || || ||||| |||| | || ||||
Sbjct 2615305 GTAGGCAATGCA-AGAGAGGCCAAGTTGCAGACAGCAACCTCGTCAGGGGCGCTATACTC 2615363
Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011
|| || || ||||| | || || || ||||||||||| |||||||| |||
Sbjct 2615364 GATAATCTCAGTGCAGAGGTTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTT 2615423
Query 81012 GGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAG 81071
||||||||| |||||||| |||| | ||||| |||||||| ||| | || |||
Sbjct 2615424 CCTGTTGCAAGCATCCTTGTACAGCATGAATGGGGTTCCGGTCTCCGTCTGCGCCTCGAG 2615483
Query 81072 GATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATA 81131
||||||| ||||| | | ||||| || | ||||| | ||||||| | ||||
Sbjct 2615484 AATGGCGTACCAAAGTTTCTGAGCCTTAACAGTCCTGCGGCCTCTGCCTTCTTGCTCATA 2615543
Query 81132 ----------------CTTGG------------CG--------TAAGCTT---------- 81145
||||| || | ||||
Sbjct 2615544 CCTAATTACAGGTTAGCTTGGTTTTTGAAAGTTCGGAGGTGAAAATGCTTACTTGTGGTA 2615603
Query 81146 -----CGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACAT 81200
| ||||||| | |||| | |||| |||| | || |||||| ||||| |
Sbjct 2615604 AAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTGGGGCAGAA 2615663
Query 81201 CAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGC 81260
||| |||||| || ||| ||| ||||||||| ||| || ||||||| ||
Sbjct 2615664 CAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTCCAGAGAGC 2615723
Query 81261 GGTGAACAGGTCGCGGCAGCGC--GCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGA 81318
| ||| || || || ||| | | || || | || ||||| ||| | || |
Sbjct 2615724 GTAGAAGAGATCACG--AGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGATCCAAG 2615781
Query 81319 AAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACGG 81378
||||| | ||| || | ||||| |||||||| || | |||| | || ||| |
Sbjct 2615782 AAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTG 2615841
Query 81379 ---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATA 81435
|| ||||||| |||||| | |||||| ||| || || || | ||| |||| ||
Sbjct 2615842 TTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGGACAATT 2615901
Query 81436 CCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATT 81495
|| | || || || ||||| ||| || || ||||||| | | |||
Sbjct 2615902 CCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGGTGGATG 2615961
Query 81496 GAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAA 81555
||||| || ||||| | |||||| ||| | ||||| || | || || |||
Sbjct 2615962 TTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTGTCGTAA 2616021
Query 81556 ATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTT 81615
|| ||||| ||||| |||| |||||||| | | ||| ||| | | ||| || |
Sbjct 2616022 ATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCTGCGG--CT 2616079
Query 81616 TTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCA 81673
||| ||||| |||||||| ||||| | || ||| |||| || | |||||||
Sbjct 2616080 GAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGGACATCA 2616139
Query 81674 GGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCA 81733
||| || || || |||| ||| || |||||||| || || | ||| |||||||
Sbjct 2616140 GGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGATTCCAACAGCAACACGCA 2616199
Query 81734 TAAACATGTACTGGGG 81749
||| ||||| ||||||
Sbjct 2616200 TAATCATGTGCTGGGG 2616215
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || |||||||||||||| || || ||||||||||| || |||
Sbjct 1741288 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAG 1741347
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || ||||| | || || || |||| ||||| || || || || || || ||
Sbjct 1741348 GACGGCCGCACCCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTG 1741407
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 1741408 CGCCTGCGTGGTGG 1741421
>seq3
Length=4355815
Score = 138 bits (152), Expect = 1e-27
Identities = 142/183 (78%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || || ||||| ||||| || || || ||||| | || | |||
Sbjct 2043672 CTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCAT 2043613
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| || | ||||| || ||||||||||||||||| || || || ||||||||||||||
Sbjct 2043612 CGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCT 2043553
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592
|| || ||||||||||| |||||||||| || || || ||| ||||| || |||| |
Sbjct 2043552 TATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTGAGC-GACTACAACATCCAGA 2043494
Query 27593 AGG 27595
|||
Sbjct 2043493 AGG 2043491
>seq2
Length=4789688
Score = 138 bits (152), Expect = 1e-27
Identities = 170/230 (74%), Gaps = 3/230 (1%)
Strand=Plus/Minus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAAT--CGTGG-GTCGTCGTTTGGTCAGCGT 64719
|| |||||||| ||||||||| |||||| | | || ||| | |||| |||||||
Sbjct 2859935 AAGAAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGAGTCCACCTTTGCTCAGCGT 2859876
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|||| || || ||| |||||| || || ||||| || || || || ||| || |||
Sbjct 2859875 CTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTTTGCTTCGATCTTC 2859816
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || ||||| || |||||||| ||||| | || || |||||||||||||||||
Sbjct 2859815 TGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACGAGCTGATCTCTCGT 2859756
Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAA 64889
|| ||||| || ||| || ||||| | |||||| |||||||||
Sbjct 2859755 GATGAGGGTCTGCACACCGACTTTGCTTGTCTGCTGTTCTCCCACCTCAA 2859706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310164746960
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