Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq7 104 2e-17
>seq7
Length=1958609
Score = 104 bits (114), Expect = 2e-17
Identities = 230/343 (67%), Gaps = 8/343 (2%)
Strand=Plus/Minus
Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30174
||||||||| |||| || |||||| || | ||| | || | | ||| | || | |
Sbjct 1119807 GGGGTTCCACGCGCTCATGATGATCCGACGGTCATAGGGCGTCTCCCTCAACTTGCGCAC 1119748
Query 30175 CACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGT 30233
|||| | || ||||| ||||| ||| |||| |||||| | | || ||| |
Sbjct 1119747 CACGTCC----GCGAGCTGGTCCACGCCCTGGCCCGTGTAGTCCGTCTTCGCGTCGACAT 1119692
Query 30234 ACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 30293
|||| || ||||| || | ||||||||| |||||||| || |||||||| || | || |
Sbjct 1119691 ACTCGGCCCCGAAGTGACGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCGACCTCGC 1119632
Query 30294 TGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30353
|||| | |||| |||||| || || | | |||||| ||||||||||||| |
Sbjct 1119631 GGTGCGACAGGCCCACGCTGTCCAGGAACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGA 1119572
Query 30354 CCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCT 30413
|| ||| |||||| |||| ||| | || || |||||| || || ||
Sbjct 1119571 TGCCGGCCTCGGAGAGCGGGACGGAGGACGTGCAGCCGGAGATGAACCAGAGGAGTTCGG 1119512
Query 30414 CCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456
| |||||||| ||||| | ||| || |||| |||||
Sbjct 1119511 CAACGACGGCGCGGAGGAAGACGCGCTTCGTGGTGATCAGGGG 1119469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310236587036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |