Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq7 96.9 3e-15
>seq7
Length=1958609
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
||||||||||| |||| || ||||| ||||| || |||| | || || | |||||
Sbjct 431427 TGACCGGCAAGACTATCACCCTTGAGGTGGAGTCGAGCGACACCATCGACAACGTCAAGT 431368
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| || || ||||| || || || || || || || ||||| || || | ||| ||||
Sbjct 431367 CCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCTTGATCTTCGCGGGCA 431308
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
| || | || ||| || || | ||||| || ||||| || |||||||| ||| | |
Sbjct 431307 AGCAGCTTGAGGACGGTCGCACGCTCTCCGACTATAACATCCAGAAGGAGTCCACCCTTC 431248
Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| |||| | ||| | || ||||| ||
Sbjct 431247 ACCTGGTGCTTCGTCTCCGTGGTGGAAT 431220
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||| ||| | ||||| || || || || ||
Sbjct 430708 ATGCAGATCTTCGTGAAGACTCTGACCGGAAAGACCATTACGCTGGAGGTCGAGAGCTCT 430649
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || || ||||| || || || ||||| || ||
Sbjct 430648 GACACAATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAG 430589
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | ||| ||||| || | || ||| || || | ||||| |||||
Sbjct 430588 CAGCGCTTGATCTTCGCGGGCAAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTACAAT 430529
Query 27168 ATTCAAAAGGAG 27179
|| || ||||||
Sbjct 430528 ATCCAGAAGGAG 430517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918220596160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |