Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq7 129 5e-25
>seq7
Length=1958609
Score = 129 bits (142), Expect = 5e-25
Identities = 213/299 (71%), Gaps = 10/299 (3%)
Strand=Plus/Plus
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT---TCCCATCT 34384
||||||||||||| |||| || || || ||||||| ||| ||| || || |
Sbjct 1119574 AAGATCTGGGACGGCAACGGCAGCCGCGAGTTCCTGGACA-GCGTGGGCCTGTCGCACCG 1119632
Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444
|| ||| |||||| ||||||| || ||||| ||||||||| | ||||| ||||| |||
Sbjct 1119633 CG--AGGTCGGCGACCTGGGCCCCGTGTACGGCTTCCAGTGGCGTCACTTCGGGGCCGAG 1119690
Query 34445 TATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503
||| | | |||||| ||||||| |||| ||||| | ||||||||| | ||||| |
Sbjct 1119691 TAT-GTCGACGCGAAGACGGACTACACGGGCCAGGGCGTGGACCAGCTCGCGGACGTGGT 1119749
Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563
|| |||| | || || ||||| | ||||| | ||| |||||||||||||
Sbjct 1119750 GCGCAAGTTGAGGGAGACGCCCTATGACCGTCGGATCATCATGAGCGCGTGGAACCCCGC 1119809
Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGTCGCG 34621
||||| |||||| ||||| ||||| || | | ||| || ||||||||| ||
Sbjct 1119810 CGATCTGAAAAAGATGGCCCTCCCGCCGTGTCATA-TGTTTGCGCAGTTCTACGTCTCG 1119867
Score = 129 bits (142), Expect = 5e-25
Identities = 213/299 (71%), Gaps = 10/299 (3%)
Strand=Plus/Minus
Query 6724 CGCGACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCT 6782
|| ||||||||| || ||| | | || ||||| ||||| |||||| |||||
Sbjct 1119867 CGAGACGTAGAACTGCGCAAACA-TATGACACGGCGGGAGGGCCATCTTTTTCAGATCGG 1119809
Query 6783 TCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGA 6842
||||||||||||| ||| | ||||| | ||||| || || | |||| || |
Sbjct 1119808 CGGGGTTCCACGCGCTCATGATGATCCGACGGTCATAGGGCGTCTCCCTCAACTTGCGCA 1119749
Query 6843 TCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATAC 6901
||||| | ||||||||| | ||||| |||| ||||||| |||||| | | ||||
Sbjct 1119748 CCACGTCCGCGAGCTGGTCCACGCCCTGGCCCGTGTAGTCCGTCTTCGCGTCGAC-ATAC 1119690
Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961
|| ||||| ||||| | ||||||||| ||||| || ||||||| |||||| ||| ||
Sbjct 1119689 TCGGCCCCGAAGTGACGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCGACCT--CGC 1119632
Query 6962 GATGGGA---ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
| || || ||| ||| ||||||| || || || |||| |||||||||||||
Sbjct 1119631 GGTGCGACAGGCCCACGC-TGTCCAGGAACTCGCGGCTGCCGTTGCCGTCCCAGATCTT 1119574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262215091760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |