Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq7 129 5e-25 >seq7 Length=1958609 Score = 129 bits (142), Expect = 5e-25 Identities = 213/299 (71%), Gaps = 10/299 (3%) Strand=Plus/Plus Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT---TCCCATCT 34384 ||||||||||||| |||| || || || ||||||| ||| ||| || || | Sbjct 1119574 AAGATCTGGGACGGCAACGGCAGCCGCGAGTTCCTGGACA-GCGTGGGCCTGTCGCACCG 1119632 Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444 || ||| |||||| ||||||| || ||||| ||||||||| | ||||| ||||| ||| Sbjct 1119633 CG--AGGTCGGCGACCTGGGCCCCGTGTACGGCTTCCAGTGGCGTCACTTCGGGGCCGAG 1119690 Query 34445 TATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503 ||| | | |||||| ||||||| |||| ||||| | ||||||||| | ||||| | Sbjct 1119691 TAT-GTCGACGCGAAGACGGACTACACGGGCCAGGGCGTGGACCAGCTCGCGGACGTGGT 1119749 Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563 || |||| | || || ||||| | ||||| | ||| ||||||||||||| Sbjct 1119750 GCGCAAGTTGAGGGAGACGCCCTATGACCGTCGGATCATCATGAGCGCGTGGAACCCCGC 1119809 Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGTCGCG 34621 ||||| |||||| ||||| ||||| || | | ||| || ||||||||| || Sbjct 1119810 CGATCTGAAAAAGATGGCCCTCCCGCCGTGTCATA-TGTTTGCGCAGTTCTACGTCTCG 1119867 Score = 129 bits (142), Expect = 5e-25 Identities = 213/299 (71%), Gaps = 10/299 (3%) Strand=Plus/Minus Query 6724 CGCGACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCT 6782 || ||||||||| || ||| | | || ||||| ||||| |||||| ||||| Sbjct 1119867 CGAGACGTAGAACTGCGCAAACA-TATGACACGGCGGGAGGGCCATCTTTTTCAGATCGG 1119809 Query 6783 TCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGA 6842 ||||||||||||| ||| | ||||| | ||||| || || | |||| || | Sbjct 1119808 CGGGGTTCCACGCGCTCATGATGATCCGACGGTCATAGGGCGTCTCCCTCAACTTGCGCA 1119749 Query 6843 TCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATAC 6901 ||||| | ||||||||| | ||||| |||| ||||||| |||||| | | |||| Sbjct 1119748 CCACGTCCGCGAGCTGGTCCACGCCCTGGCCCGTGTAGTCCGTCTTCGCGTCGAC-ATAC 1119690 Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961 || ||||| ||||| | ||||||||| ||||| || ||||||| |||||| ||| || Sbjct 1119689 TCGGCCCCGAAGTGACGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCGACCT--CGC 1119632 Query 6962 GATGGGA---ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 | || || ||| ||| ||||||| || || || |||| ||||||||||||| Sbjct 1119631 GGTGCGACAGGCCCACGC-TGTCCAGGAACTCGCGGCTGCCGTTGCCGTCCCAGATCTT 1119574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262215091760