Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq7 172 1e-37
seq3 109 1e-18
seq1 98.7 2e-15
>seq7
Length=1958609
Score = 172 bits (190), Expect = 1e-37
Identities = 172/223 (77%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| ||||| || || ||||| |||||| ||| || ||||| || || || | || ||
Sbjct 430487 ACGGAGTCTGAGAACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGAGAGCGT 430546
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || ||||||||||| |||||||| | ||| || ||||| || || | ||
Sbjct 430547 GCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACC 430606
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| |||||||| ||||| ||||||||||| || ||||| ||
Sbjct 430607 CTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGCTCTCGACCTCCAG 430666
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || |||||||| || |||||||| || || | |||||||
Sbjct 430667 CGTAATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCATT 430709
Score = 168 bits (186), Expect = 2e-36
Identities = 160/203 (79%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| |||||| ||| || ||||||||||| || | |||||| | |||||
Sbjct 430953 AGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGGAAAGGGTGCGGCCATCC 431012
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||||||||||||||| ||||| || ||||| || || | || |||||||||
Sbjct 431013 TCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 431072
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079
|||||||| || ||||| ||||||||||| ||| || ||||| || |||||
Sbjct 431073 TGGATCTTGGACTTGACGTTGTCGATGGTGTC---GCTCGACTCCACCTCCAGGGTGATA 431129
Query 211080 GTCTTTCCCGTGAGAGTCTTTAC 211102
||||| || ||||| ||||| ||
Sbjct 431130 GTCTTGCCGGTGAGGGTCTTGAC 431152
Score = 165 bits (182), Expect = 2e-35
Identities = 172/226 (76%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | ||||||||||| || || ||||| || || || || || || | |
Sbjct 430712 TCCACGCAGGCGGAGGACAAGGTGCAGTGTAGACTCCTTCTGAATATTGTAGTCTGACAA 430771
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||| | ||||| ||||||||||| || ||||||||||| || || ||||| || ||||
Sbjct 430772 GGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAAT 430831
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| |||||||||||||| || |||||||| |||||||| || || ||| || ||
Sbjct 430832 ACCCTCCTTGTCCTGGATTTTCGACTTCACGTTATCGATGGTATCTGACGATTCGACTTC 430891
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||| || || |||||||| ||||| ||||| || || | |||||||
Sbjct 430892 GAGGGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCATT 430937
Score = 134 bits (148), Expect = 3e-26
Identities = 145/191 (76%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| |||||||| || ||||||||||| || | || || | || ||
Sbjct 431238 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGCGTGCGACCGTCC 431297
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| | ||| || ||||| || || | || |||||||||
Sbjct 431298 TCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 431357
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079
|||||||| || ||||| ||||||||||| ||| || ||||| || |||||
Sbjct 431358 TGGATCTTGGACTTGACGTTGTCGATGGTGTC---GCTCGACTCCACCTCAAGGGTGATA 431414
Query 211080 GTCTTTCCCGT 211090
||||| || ||
Sbjct 431415 GTCTTGCCGGT 431425
>seq3
Length=4355815
Score = 109 bits (120), Expect = 1e-18
Identities = 134/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || || || | ||||| || |||||||| || |||||||||
Sbjct 2043493 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATA 2043552
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || ||||| || || | || ||||||||||| ||||| || ||||| |||
Sbjct 2043553 AGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCG 2043612
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| || || ||||| || || ||||| ||||| || ||||| ||
Sbjct 2043613 ATGGTGTC---GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2043669
Query 211104 AA 211105
||
Sbjct 2043670 AA 2043671
>seq1
Length=6618042
Score = 98.7 bits (108), Expect = 2e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 178229 TACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCA 178288
||||| | ||| || ||||||| ||| || || |||||| |||| || ||||||||
Sbjct 2615593 TACTTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCG 2615652
Query 178289 TTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAG 178348
||||||||||| || |||| | ||||| ||| || || |||||||||||||| |
Sbjct 2615653 TTGGGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGA 2615712
Query 178349 GTCCAGATGGCATAGAA 178365
||||||| || |||||
Sbjct 2615713 GTCCAGAGAGCGTAGAA 2615729
Score = 93.3 bits (102), Expect = 1e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| ||||||| ||||| | || ||
Sbjct 1741406 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGGCCGTCC 1741347
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
||||||||||| || |||||||| || || || ||||| || || | || ||||||||
Sbjct 1741346 TCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 1741288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151509896045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |