Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq7 100 2e-16
>seq7
Length=1958609
Score = 100 bits (110), Expect = 2e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || |||||||| || || || ||||| |||| ||| || || | || || |||||
Sbjct 430962 TGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGC 431021
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||||||||| | ||| | | ||| |||||| ||| ||
Sbjct 431022 TTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTG 431081
Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | || |||||||||||||| |||| |||||| | || || ||
Sbjct 431082 GACTTGA-CGTTGTCGATGGTGTCGCTCGACTCCACCTCCAGGGTGATAGTCTTGCCGGT 431140
Query 39261 CAGCGTTTTAAC 39272
|| || || ||
Sbjct 431141 GAGGGTCTTGAC 431152
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| || || ||| ||| || || || ||||| |||| || || || |||| ||
Sbjct 431240 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGCGTGCGACCGTCCTC 431299
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
|||||| |||||||| || || | ||||||||||| | ||| | | ||| ||||||
Sbjct 431300 AAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTG 431359
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
||| || |||| ||| | | | || |||||||||||||| || | |||||| | |
Sbjct 431360 GATCTTGGACTTGA-CGTTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCT 431418
Query 39254 TTCCCGTCA 39262
| || ||||
Sbjct 431419 TGCCGGTCA 431427
Score = 89.7 bits (98), Expect = 4e-13
Identities = 152/214 (71%), Gaps = 10/214 (5%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || || |||||||| || || ||||| || |||| || || || |||| |||
Sbjct 430500 ACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGAGAGCGTGCGACCGTCCTCA 430559
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCAT 39194
||||| |||||||| || || | ||||||||||| |||||| | | ||| ||||||
Sbjct 430560 AGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTGGG-ATACCCTCCTTGTCCTG 430618
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATAC 39250
||| || || | ||| | | | || || ||| ||| || |||| ||| ||
Sbjct 430619 GATCTTGCTCTTCA-CGTTGTCGATTGTGTCAGAGCT---CTCGACCTCCAGCGTAATGG 430674
Query 39251 TTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| ||||| ||||| || || || ||||| |||||
Sbjct 430675 TCTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 430708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545427242129
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |