Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq7 100 2e-16 >seq7 Length=1958609 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || |||||||| || || || ||||| |||| ||| || || | || || ||||| Sbjct 430962 TGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGC 431021 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | | ||| |||||| ||| || Sbjct 431022 TTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTG 431081 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | || |||||||||||||| |||| |||||| | || || || Sbjct 431082 GACTTGA-CGTTGTCGATGGTGTCGCTCGACTCCACCTCCAGGGTGATAGTCTTGCCGGT 431140 Query 39261 CAGCGTTTTAAC 39272 || || || || Sbjct 431141 GAGGGTCTTGAC 431152 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || || ||| ||| || || || ||||| |||| || || || |||| || Sbjct 431240 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGCGTGCGACCGTCCTC 431299 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| |||||||| || || | ||||||||||| | ||| | | ||| |||||| Sbjct 431300 AAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTG 431359 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || |||| ||| | | | || |||||||||||||| || | |||||| | | Sbjct 431360 GATCTTGGACTTGA-CGTTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCT 431418 Query 39254 TTCCCGTCA 39262 | || |||| Sbjct 431419 TGCCGGTCA 431427 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/214 (71%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || ||||| || |||| || || || |||| ||| Sbjct 430500 ACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGAGAGCGTGCGACCGTCCTCA 430559 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || | ||||||||||| |||||| | | ||| |||||| Sbjct 430560 AGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTGGG-ATACCCTCCTTGTCCTG 430618 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATAC 39250 ||| || || | ||| | | | || || ||| ||| || |||| ||| || Sbjct 430619 GATCTTGCTCTTCA-CGTTGTCGATTGTGTCAGAGCT---CTCGACCTCCAGCGTAATGG 430674 Query 39251 TTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || || || ||||| ||||| Sbjct 430675 TCTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 430708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545427242129