Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 7e-16 >seq7 Length=1958609 Score = 98.7 bits (108), Expect = 7e-16 Identities = 229/343 (67%), Gaps = 8/343 (2%) Strand=Plus/Minus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 27440 ||||||||| |||| || |||||| || | ||| | || | | ||| | || | | Sbjct 1119807 GGGGTTCCACGCGCTCATGATGATCCGACGGTCATAGGGCGTCTCCCTCAACTTGCGCAC 1119748 Query 27441 CACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGT 27499 |||| | || ||||| ||||| ||| |||| |||||| | || ||| | Sbjct 1119747 CACGTCC----GCGAGCTGGTCCACGCCCTGGCCCGTGTAGTCCGTCTTCGCGTCGACAT 1119692 Query 27500 ACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 27559 |||| || ||||| || | ||| ||||| |||||||| || |||||||| || | || | Sbjct 1119691 ACTCGGCCCCGAAGTGACGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCGACCTCGC 1119632 Query 27560 TGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 27619 |||| | |||| |||||| || || | | |||||| ||||||||||||| | Sbjct 1119631 GGTGCGACAGGCCCACGCTGTCCAGGAACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGA 1119572 Query 27620 CCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCT 27679 || |||||||||| |||| ||| | || || |||||| || || || Sbjct 1119571 TGCCGGCCTCGGAGAGCGGGACGGAGGACGTGCAGCCGGAGATGAACCAGAGGAGTTCGG 1119512 Query 27680 CCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | |||||||| ||||| | ||| || |||| ||||| Sbjct 1119511 CAACGACGGCGCGGAGGAAGACGCGCTTCGTGGTGATCAGGGG 1119469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507051388823