Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 197 2e-45 >seq1 Length=6618042 Score = 197 bits (218), Expect = 2e-45 Identities = 584/896 (65%), Gaps = 6/896 (1%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || || || || | |||||| | | |||||| || || || || | || || | Sbjct 2615611 TCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTGGGGCAGAACAGTGTC 2615670 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||| | ||| || || ||||| ||||| || || |||| ||||| || Sbjct 2615671 CAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTCCAGAGAGCGTAGAAG 2615730 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| || | |||| |||||| || || ||||| |||||| | ||| || | Sbjct 2615731 AGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGATCCAAGAAGTCGAAG 2615790 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 |||||||| ||||| || || || || || || | | |||| || || || || |||||| Sbjct 2615791 ATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTTCCTCCC 2615850 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | |||||||||||||| || | || | | ||| || | ||| ||||| || Sbjct 2615851 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGGACAATTCCGTTGGAA 2615910 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | ||||| || ||||| || || || || || ||| || || || Sbjct 2615911 GATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGGTGGATGTTGAGACCA 2615970 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || ||||| || ||||| || | ||||| || || ||||| Sbjct 2615971 ATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTGTCGTAAATACCCTCA 2616030 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || || || ||| |||||| | || || ||| | | || | ||| ||| || Sbjct 2616031 ATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCTGCGGCTGAGGAGTACCG 2616090 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 || || |||| || ||||| ||||||||||| | || | || | || ||||| || Sbjct 2616091 GCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGGACATCAGGTTGTACGTC 2616150 Query 77060 TCAATAACTGCTTCTATATCCCAT--TGATGAATTCCTACAGCGACACGCATCAACATAT 77117 ||||| || ||||| || ||| || ||||| ||||| |||||||| | ||| | Sbjct 2616151 TCAATGAC--CTTCTCAATGTCATCACCGTGGATTCCAACAGCAACACGCATAATCATGT 2616208 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 |||| || ||||| || ||| ||| || | ||||||||| |||| || | Sbjct 2616209 GCTGGGGACGTTCCGCAACCTTGCCATTGATCCGAAGCAAGTATGAGCGCTCCAGGGTCT 2616268 Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGT 77237 | || || ||||| | || ||||| | || || | || | || || | || || Sbjct 2616269 TGAATCCGAAATATTGATAGTTGAAGTCACGGTCATACACGATGGCGGAGTTCAATTCGT 2616328 Query 77238 CCTTATATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTGGAGATCGTATTCCA 77296 || || ||| |||| | || ||| | || || || |||| | || Sbjct 2616329 CCGCATGTTTCATAACGACCTCATATG-TTTCCTTCGATATCATCGGAGCGGGCTGGCCG 2616387 Query 77297 TTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTT 77356 || || || || ||||||| | | |||| || || | ||| | || || || Sbjct 2616388 TTCTTCGGGTTGACATAGTGGTACAGGTCTGAGATAACCAGGGAAAACTGCTTCTTCGTC 2616447 Query 77357 TCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 | |||||| || ||||| |||||||| | ||||| || ||||||||||| || || Sbjct 2616448 TGCTTGTGCAGGTTCGACACGGCTATACGCGCAGCGAGGATTGCATAGTCTGGGTG 2616503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934105914560