Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq7 168 1e-36
seq3 134 3e-26
seq1 102 2e-16
seq2 98.7 2e-15
>seq7
Length=1958609
Score = 168 bits (186), Expect = 1e-36
Identities = 179/231 (77%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || | || ||||| || | ||||| || || ||||| |||||||| |
Sbjct 430481 ACCACCACGGAGTCTGAGAACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGA 430540
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|||||||| || ||||| || || || || || |||||||| || || ||||| ||
Sbjct 430541 GAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTGG 430600
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCG 283049
|||||||||||||| |||||| ||||| || ||| | ||||| ||||| | |||| |||
Sbjct 430601 GATACCCTCCTTGTCCTGGATC-TTGCTCTTCACGTTGTCGATTGTGTCAG-AGCTCTCG 430658
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| || || || || ||||| || |||| |||||| ||||| |||||||||
Sbjct 430659 ACCTCCAGCGTAATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCATT 430709
Score = 158 bits (174), Expect = 3e-33
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
|| ||||||||||| || || || || | || || || || || |||||||| | |
Sbjct 430710 CCTCCACGCAGGCGGAGGACAAGGTGCAGTGTAGACTCCTTCTGAATATTGTAGTCTGAC 430769
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || || || ||||| | ||| || ||||| ||
Sbjct 430770 AAG-GTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCCGGGGG 430828
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| ||||| || | || ||| ||||||| || || || | ||||||
Sbjct 430829 AATACCCTCCTTGTCCTGGATTTTCGACTTCACGTTATCGATGGTATCTGACGATTCGAC 430888
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|||||| || || ||||| || || | ||||| ||||| |||||||||
Sbjct 430889 TTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCATT 430937
Score = 143 bits (158), Expect = 6e-29
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || || || || | ||||| || || |||||||| ||||| | |
Sbjct 430938 CCACCACGCAGACGCAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGGAA 430997
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| |||||||||||||| || || || || || ||||||| || || ||||| ||
Sbjct 430998 AGGGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 431057
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|||||||||||||| |||||||| | || ||| | ||||| ||||| | || ||
Sbjct 431058 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCACC 431117
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
|| || ||||| ||||| || || | ||||| ||||
Sbjct 431118 TCCAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 431154
Score = 131 bits (144), Expect = 4e-25
Identities = 152/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || ||||| ||||| || | ||| || || |||||||| ||||| |
Sbjct 431223 CCACCACGGAGACGAAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 431282
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|||||||| || ||||| || || || || || |||||||| || || ||||| ||
Sbjct 431283 AGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGG 431342
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|||||||||||||| |||||||| | || ||| | ||||| ||||| | || ||
Sbjct 431343 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCACC 431402
Query 283053 TCGAGAGTGATCGTCTTACCCGTCA 283077
|| || ||||| ||||| || ||||
Sbjct 431403 TCAAGGGTGATAGTCTTGCCGGTCA 431427
>seq3
Length=4355815
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || |||||||||||||| || || || || || |||||
Sbjct 2043493 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATA 2043552
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || ||||| || |||||||||||||| || ||||| || || ||| | |||
Sbjct 2043553 AGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCG 2043612
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | ||||| ||||| || || ||||||||||||| ||||| |||||
Sbjct 2043613 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2043671
>seq1
Length=6618042
Score = 102 bits (112), Expect = 2e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || ||||| || | || || || ||||||||||| || |
Sbjct 1741422 ACCACCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 1741363
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || || || ||||||| ||| || ||||| ||
Sbjct 1741362 GAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 1741303
Query 282992 AATACCCTCCTTGTCT 283007
|||||||||||||||
Sbjct 1741302 GATACCCTCCTTGTCT 1741287
>seq2
Length=4789688
Score = 98.7 bits (108), Expect = 2e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 230229 GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTG 230288
|||||||| || | |||||| | || || ||||| ||||| ||||| || || |||||
Sbjct 2859608 GGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGACTTCTCGTG 2859549
Query 230289 GCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATT 230348
|| || || || |||| || ||| ||| || ||||||| || ||||| |||
Sbjct 2859548 GCTCTTGGCAACAAGAAGTACTACAACGCCACCAATCCCTTCGACTTCATGGACAACATC 2859489
Query 230349 TCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGT 230408
|| || || || || ||||||||||| ||||||||| | || || || | | |||||
Sbjct 2859488 TCGCTGTCCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGT 2859429
Query 230409 GT 230410
||
Sbjct 2859428 GT 2859427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738757425582
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |