Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq7 159 2e-34
seq1 98.7 7e-16
seq3 95.1 9e-15
>seq7
Length=1958609
Score = 159 bits (176), Expect = 2e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||| | |||||||| || ||||||||||| ||||| ||||| |||| ||| |||
Sbjct 430491 AGTCTGAGAACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGAGAGCGTGCGA 430550
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
|||| || |||||||| || || |||||||| |||||||| |||| || | ||| |||
Sbjct 430551 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCC 430610
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||||| | | || ||||| | | || ||||||| ||||
Sbjct 430611 TTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGCTCTCGACCTCCAGCGTA 430670
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||| || || |||||||||||||| |||||
Sbjct 430671 ATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 430708
Score = 132 bits (146), Expect = 3e-26
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || | ||| | || || ||||| || ||||||||||| |||||||| || ||
Sbjct 430934 CATTCCACCACGCAGACGCAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTC 430993
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| || || ||||||| |||||||| ||||
Sbjct 430994 GGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGG 431053
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||| ||||| ||| ||||| ||| | | | ||||||||| || ||
Sbjct 431054 GGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTC 431113
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
|||||||| || || ||||| || ||||||||||| ||||
Sbjct 431114 CACCTCCAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 431154
Score = 116 bits (128), Expect = 3e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || | || | | |||||||||||| ||| |||||| |||||||| || ||
Sbjct 431219 CATTCCACCACGGAGACGAAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTC 431278
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| |||| || |||||||| || || |||||||| |||||||| ||||
Sbjct 431279 GGAGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGG 431338
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||| ||||| ||| ||||| ||| | | | ||||||||| || ||
Sbjct 431339 GGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTC 431398
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGT 44313
|||||| | || || ||||| || ||
Sbjct 431399 CACCTCAAGGGTGATAGTCTTGCCGGT 431425
Score = 114 bits (126), Expect = 9e-21
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || | ||| | | || ||||| || || |||||| || || ||||| ||
Sbjct 430706 CATTCCTCCACGCAGGCGGAGGACAAGGTGCAGTGTAGACTCCTTCTGAATATTGTAGTC 430765
Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| | || || || | || ||||||||||| || || ||||| | ||||||||| || |
Sbjct 430766 TGACAAGGTGCGGC-CATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCCG 430824
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
|| | ||| ||||| ||| || ||| ||||| | | ||||| || | ||||
Sbjct 430825 GGGGAATACCCTCCTTGTCCTGGATTTTCGACTTCACGTTATCGATGGTATCTGACGATT 430884
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | ||||| |||||||| ||||||||||| ||||| || |||||
Sbjct 430885 CGACTTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCAT 430936
>seq1
Length=6618042
Score = 98.7 bits (108), Expect = 7e-16
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || ||||||||| || || |||||| |||||||||||||| | |
Sbjct 1741421 CCACCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAG 1741362
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| |||| ||||||||||| || || ||||||| ||||||||| || | ||
Sbjct 1741361 AGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1741302
Query 44231 ACACCTTCCTTTTCCGT 44247
| ||| ||||| || ||
Sbjct 1741301 ATACCCTCCTTGTCTGT 1741285
>seq3
Length=4355815
Score = 95.1 bits (104), Expect = 9e-15
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| ||| || ||| | || || |||||||| || || ||||
Sbjct 2043491 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 2043550
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267
| | ||||||||| || | || | ||| ||||| ||| ||||| ||| | |
Sbjct 2043551 TAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT 2043610
Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
| ||||||||| || || || || | ||||| ||||| ||||| |||||||| ||||
Sbjct 2043611 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2043670
Query 44328 AG 44329
||
Sbjct 2043671 AG 2043672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990255216361
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |