Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7 141 2e-28 seq3 131 4e-25 seq1 91.5 4e-13 >seq7 Length=1958609 Score = 141 bits (156), Expect = 2e-28 Identities = 157/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| ||||| || || |||||||| || ||| ||||| Sbjct 430933 CAGATTTTCGTCAAGACCCTCACCGGAAAGACCATTACCCTCGAAGTCGAATCGTCAGAT 430874 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || || || |||||||| || || || || ||||||||||| Sbjct 430873 ACCATCGATAACGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 430814 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || ||||||||||| || || ||||| || ||||| | || |||| | || || || | Sbjct 430813 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCAC-CTTGTCAGACTACAATAT 430755 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 || || || || |||||||| ||||| Sbjct 430754 TCAGAAGGAGTCTACACTGCACCTTGT 430728 Score = 140 bits (154), Expect = 8e-28 Identities = 153/202 (76%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCA 177987 |||| || || ||||| || || || |||||||| |||||||| ||| ||||||| Sbjct 431154 TCGTCAAGACCCTCACCGGCAAGACTATCACCCTGGAGGTGGAGTCGAGC---GACACCA 431098 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 |||| |||||||| ||||| |||||||| || || ||||| || |||||||| || | Sbjct 431097 TCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCC 431038 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | |||||||| || || |||||||| ||||| | || ||| |||| |||||| |||| | Sbjct 431037 TGATCTTCGCAGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGACTATAACATCCAGA 430978 Query 178108 AAGAATCAACACTGCATCTTGT 178129 | || || || || ||||| Sbjct 430977 AGGAGAGCACTCTCCACCTTGT 430956 Score = 114 bits (126), Expect = 3e-20 Identities = 139/188 (74%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || |||||||| |||||||| ||| ||||||||||| |||||||| Sbjct 431425 ACCGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC---GACACCATCGACAACGTCAAG 431369 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || | |||||||| || Sbjct 431368 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCTTGATCTTCGCGGGC 431309 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || ||||| || || || | || || |||| |||||| |||| || || || || || Sbjct 431308 AAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTATAACATCCAGAAGGAGTCCACCCTT 431249 Query 178122 CATCTTGT 178129 || || || Sbjct 431248 CACCTGGT 431241 >seq3 Length=4355815 Score = 131 bits (144), Expect = 4e-25 Identities = 139/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACC 177986 ||||| || || || || || || || || |||||||| || || ||| |||||| Sbjct 2043671 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACACC 2043615 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 ||||| |||||||| |||||||||||||| || || ||||| ||||||||||| || Sbjct 2043614 ATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGT 2043555 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 ||||||||||| || || |||||||| ||||| | ||||| ||| || ||| |||| Sbjct 2043554 CTTATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAG 2043495 Query 178107 AA 178108 || Sbjct 2043494 AA 2043493 >seq1 Length=6618042 Score = 91.5 bits (100), Expect = 4e-13 Identities = 152/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 214264 TACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCTCG 214323 ||||| | ||||||| ||| || ||| ||||| |||||| | || || ||||||||| Sbjct 2615593 TACTTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCG 2615652 Query 214324 TTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGGAA 214383 ||||||||||| || |||| | || || || ||| | |||||||| ||||| | | Sbjct 2615653 TTGGGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGA 2615712 Query 214384 GTCCAGATTGCATAAAAAATCTCTCTGGCTCTCATAAGGTCATCACCTCCC--GGTTTTT 214441 ||||||| || || || | || | |||| ||| || || | | || |||| || Sbjct 2615713 GTCCAGAGAGCGTAGAAGAGATCACGAGCTC---TAACTTCTTC-CTTGCCGTGGTTCTT 2615768 Query 214442 TCG--CGTCGACAAAGTCAAAGATATCAACGTGCCA 214475 || || | ||||| ||||||||| |||||| Sbjct 2615769 GCGAAGATCCAAGAAGTCGAAGATATCAGAGTGCCA 2615804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730691047402