Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq7 141 2e-28
seq3 131 4e-25
seq1 91.5 4e-13
>seq7
Length=1958609
Score = 141 bits (156), Expect = 2e-28
Identities = 157/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| ||||| || || |||||||| || ||| |||||
Sbjct 430933 CAGATTTTCGTCAAGACCCTCACCGGAAAGACCATTACCCTCGAAGTCGAATCGTCAGAT 430874
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || || || |||||||| || || || || |||||||||||
Sbjct 430873 ACCATCGATAACGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 430814
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| ||||||||||| || || ||||| || ||||| | || |||| | || || || |
Sbjct 430813 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCAC-CTTGTCAGACTACAATAT 430755
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || |||||||| |||||
Sbjct 430754 TCAGAAGGAGTCTACACTGCACCTTGT 430728
Score = 140 bits (154), Expect = 8e-28
Identities = 153/202 (76%), Gaps = 6/202 (3%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCA 177987
|||| || || ||||| || || || |||||||| |||||||| ||| |||||||
Sbjct 431154 TCGTCAAGACCCTCACCGGCAAGACTATCACCCTGGAGGTGGAGTCGAGC---GACACCA 431098
Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047
|||| |||||||| ||||| |||||||| || || ||||| || |||||||| || |
Sbjct 431097 TCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCC 431038
Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107
| |||||||| || || |||||||| ||||| | || ||| |||| |||||| |||| |
Sbjct 431037 TGATCTTCGCAGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGACTATAACATCCAGA 430978
Query 178108 AAGAATCAACACTGCATCTTGT 178129
| || || || || |||||
Sbjct 430977 AGGAGAGCACTCTCCACCTTGT 430956
Score = 114 bits (126), Expect = 3e-20
Identities = 139/188 (74%), Gaps = 6/188 (3%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001
|| || || || |||||||| |||||||| ||| ||||||||||| ||||||||
Sbjct 431425 ACCGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC---GACACCATCGACAACGTCAAG 431369
Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061
||||| |||||||| || || ||||| || |||||||| || | |||||||| ||
Sbjct 431368 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCTTGATCTTCGCGGGC 431309
Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121
|| ||||| || || || | || || |||| |||||| |||| || || || || ||
Sbjct 431308 AAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTATAACATCCAGAAGGAGTCCACCCTT 431249
Query 178122 CATCTTGT 178129
|| || ||
Sbjct 431248 CACCTGGT 431241
>seq3
Length=4355815
Score = 131 bits (144), Expect = 4e-25
Identities = 139/182 (76%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACC 177986
||||| || || || || || || || || |||||||| || || ||| ||||||
Sbjct 2043671 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACACC 2043615
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
||||| |||||||| |||||||||||||| || || ||||| ||||||||||| ||
Sbjct 2043614 ATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGT 2043555
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
||||||||||| || || |||||||| ||||| | ||||| ||| || ||| ||||
Sbjct 2043554 CTTATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAG 2043495
Query 178107 AA 178108
||
Sbjct 2043494 AA 2043493
>seq1
Length=6618042
Score = 91.5 bits (100), Expect = 4e-13
Identities = 152/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 214264 TACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCTCG 214323
||||| | ||||||| ||| || ||| ||||| |||||| | || || |||||||||
Sbjct 2615593 TACTTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCG 2615652
Query 214324 TTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGGAA 214383
||||||||||| || |||| | || || || ||| | |||||||| ||||| | |
Sbjct 2615653 TTGGGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGA 2615712
Query 214384 GTCCAGATTGCATAAAAAATCTCTCTGGCTCTCATAAGGTCATCACCTCCC--GGTTTTT 214441
||||||| || || || | || | |||| ||| || || | | || |||| ||
Sbjct 2615713 GTCCAGAGAGCGTAGAAGAGATCACGAGCTC---TAACTTCTTC-CTTGCCGTGGTTCTT 2615768
Query 214442 TCG--CGTCGACAAAGTCAAAGATATCAACGTGCCA 214475
|| || | ||||| ||||||||| ||||||
Sbjct 2615769 GCGAAGATCCAAGAAGTCGAAGATATCAGAGTGCCA 2615804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730691047402
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |