Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq7 165 8e-36 seq3 123 2e-23 seq1 107 2e-18 >seq7 Length=1958609 Score = 165 bits (182), Expect = 8e-36 Identities = 169/218 (78%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || |||||||||||||| |||||||||||||| Sbjct 430938 CCACCACGCAGACGCAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGGAA 430997 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||| ||||| ||||||||||| ||||| | ||| Sbjct 430998 AGGGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 431057 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | ||||||||||||||||| Sbjct 431058 ATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGCTCGACTCCAC 431116 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||||| || || || || || || || ||||| |||| Sbjct 431117 CTCCAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 431154 Score = 149 bits (164), Expect = 6e-31 Identities = 158/206 (77%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || ||| ||||||||| ||||||||||||||| Sbjct 431223 CCACCACGGAGACGAAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 431282 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||||||||| ||||| |||| |||||| ||||| | ||| Sbjct 431283 AGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGG 431342 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | ||||||||||||||||| Sbjct 431343 ATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGCTCGACTCCAC 431401 Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840 ||| | || || || || || |||| Sbjct 431402 CTCAAGGGTGATAGTCTTGCCGGTCA 431427 Score = 143 bits (158), Expect = 2e-29 Identities = 162/213 (76%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || |||||||||||||| || || ||||||||||| ||||| |||| || Sbjct 430500 ACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGAGAGCGTGCGACCGTCCTCA 430559 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| ||||| |||| |||||| ||||| | || | | |||||||||| | Sbjct 430560 AGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGG 430619 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGT 41829 || || |||| ||| | | | ||||| ||| ||| ||||||| ||| || || Sbjct 430620 ATCTTGCTCTTC-ACGTTGTCGATTGTGTCAGAGCT---CTCGACCTCCAGCGTAATGGT 430675 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||| ||||| ||||| |||||||| Sbjct 430676 CTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 430708 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || ||||| || |||||||||||| || ||||| || Sbjct 430710 CCTCCACGCAGGCGGAGGACAAGGTGCAGTGTAGACTCCTTCTGAATATTGTAGTCTGAC 430769 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || || |||||||| || ||||| || || ||||| ||||||| |||| Sbjct 430770 AAGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCCGGGGGA 430829 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| |||||| |||| ||| | | || || ||| || || Sbjct 430830 ATACCCTCCTTGTCCTGGATTTTCGACTTC-ACGTTATCGATGGTATCTGACGATTCGAC 430888 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || || || ||||| |||||||||||||| Sbjct 430889 TTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCAT 430936 >seq3 Length=4355815 Score = 123 bits (136), Expect = 2e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| || ||||| | || ||||||||||| || ||||| | Sbjct 2043491 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 2043550 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 | || ||||| ||||||| ||| | | |||||||||| ||| | || || | ||| | Sbjct 2043551 TAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTG 2043609 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 2043610 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2043669 Query 41852 AA 41853 || Sbjct 2043670 AA 2043671 >seq1 Length=6618042 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || || ||||||||| ||||| || || ||| Sbjct 1741421 CCACCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAG 1741362 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || |||||||| || ||||| ||||| ||||| ||||||| ||| Sbjct 1741361 AGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1741302 Query 41756 ACGCTCTCCTTGTC 41769 | | ||||||||| Sbjct 1741301 ATACCCTCCTTGTC 1741288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303809299600