Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq90 111 2e-19
>seq90
Length=200924
Score = 111 bits (122), Expect = 2e-19
Identities = 344/529 (65%), Gaps = 19/529 (4%)
Strand=Plus/Minus
Query 17000 ATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATC 17059
|| || ||||| ||||| |||| ||||||||| || || || | ||| || ||
Sbjct 194388 ATCAGCTCGTTGGAAAAGGTCAGACCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATG 194329
Query 17060 GCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCG 17119
| ||| || | || || ||||| || |||||||||| ||||| || | | || | |
Sbjct 194328 GAGGCAAAGGCGCCCGAGAAGAAGATGCCCTCGACGGCGGCAAAGGCCACCAGACGCTGG 194269
Query 17120 GCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATG 17179
|| | |||| || | |||||| || | |||| ||||| || | |||
Sbjct 194268 GCAAAGGTCGACTCGCGATCGGAAATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATG 194209
Query 17180 CAATCCATCGTTTCTATGGCCTTAAA----TAATTTCTCTTTTTCCTGTAGG-TCGATTA 17234
|| || || || ||||| || || || | | || | ||| || | |
Sbjct 194208 CAGGGAATGGTGTCGATGGCGTTGAACAGGTAGCTGCGCTGG-----GCAGGCTCCTTGA 194154
Query 17235 TATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAA 17294
| ||||| |||||||| || |||| | || ||||| ||||||||||| ||||| |
Sbjct 194153 TGTACGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGA 194094
Query 17295 ATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGAT 17354
| ||||| ||||| ||||| || | || || || || | |||| || || | || |
Sbjct 194093 AGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGAGAAACGCTCAACCAGGT 194034
Query 17355 TTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATT 17414
| ||||| || |||||||| || || ||||| |||| | ||| |||||||| |
Sbjct 194033 TCTCGTTGACAATGCCGTCCGAGGCAGCAAAAAAGGCCAGGACGTGCGAGATGAAATACT 193974
Query 17415 TTTCGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTGGATATATCCACTT 17468
| || ||| ||| | ||| |||||| | | ||| ||||| | ||| | |
Sbjct 193973 TCTCATCC-TTGT--TCATGCGGTTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCT 193917
Query 17469 CTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
| |||| ||||| ||| ||| | ||||| || ||||| | ||| ||
Sbjct 193916 CCTCGGCCGTCCAGAAAGACGCCTCGGCCTTCTTGTACATCTGCCAGAT 193868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517542100097880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |