Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq90 87.8 2e-12 >seq90 Length=200924 Score = 87.8 bits (96), Expect = 2e-12 Identities = 193/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || ||||| || || || | |||| | || ||||| |||||||| || ||||| Sbjct 194154 ATGTACGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGG 194095 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || || |||||||| || ||||| | || || || || | | || || || ||||| Sbjct 194094 AAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGAGAAACGCTCAACCAGG 194035 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 ||||| || || || ||||| ||||||||||| |||| | |||| |||||||| Sbjct 194034 TTCTCGTTGACAATGCCGTCCGAGGCAGCAAAAAAGGCCAGGACGTGCGAGATGAAATAC 193975 Query 16652 TTTTCGTC--AGAT-GTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708 || || || | | | | | | ||| || | | ||| ||||| | ||| | || Sbjct 193974 TTCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCTCC 193915 Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || | |||||| || ||| | ||||| || ||||| | ||| || Sbjct 193914 TCGGCCGTCCAGAAAGACGCCTCGGCCTTCTTGTACATCTGCCAGAT 193868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511410941560120