Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq90 87.8 2e-12
>seq90
Length=200924
Score = 87.8 bits (96), Expect = 2e-12
Identities = 193/287 (67%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| ||||| || || || | |||| | || ||||| |||||||| || |||||
Sbjct 194154 ATGTACGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGG 194095
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
|| || |||||||| || ||||| | || || || || | | || || || |||||
Sbjct 194094 AAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGAGAAACGCTCAACCAGG 194035
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651
||||| || || || ||||| ||||||||||| |||| | |||| ||||||||
Sbjct 194034 TTCTCGTTGACAATGCCGTCCGAGGCAGCAAAAAAGGCCAGGACGTGCGAGATGAAATAC 193975
Query 16652 TTTTCGTC--AGAT-GTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708
|| || || | | | | | | ||| || | | ||| ||||| | ||| | ||
Sbjct 193974 TTCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCTCC 193915
Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755
|| | |||||| || ||| | ||||| || ||||| | ||| ||
Sbjct 193914 TCGGCCGTCCAGAAAGACGCCTCGGCCTTCTTGTACATCTGCCAGAT 193868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511410941560120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |