Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq90 104 3e-17
>seq90
Length=200924
Score = 104 bits (114), Expect = 3e-17
Identities = 360/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194
|| || || ||| ||| || || ||||| | ||| | ||||||||||| || ||
Sbjct 194424 CAGGCAAAGTCGGTGTGCAGGCCTTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGA 194365
Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254
|||||||| || |||||||| ||||| || ||||| ||||| | || || |||||
Sbjct 194364 CCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAG 194305
Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA-ACCG--GCGCTGTCATGT 24311
|| || || || || |||||||| | || | | || | || ||| ||
Sbjct 194304 ATGCCCTCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGGTCGACTCGCGATCGGAA 194245
Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371
|||||||| | ||||| |||||||| | || || || || || || || ||
Sbjct 194244 ATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTG 194185
Query 24372 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 24431
|| || ||| | | | || || | || || || || | || ||| |
Sbjct 194184 AACAGGTAGCTGCGCTGGGCAGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTC 194125
Query 24432 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 24491
||||| || ||||| || || || || || |||||||| || | ||||||| |||
Sbjct 194124 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATC 194065
Query 24492 TGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 24551
|| || || | || || || | | || || || || || ||||| ||| |||
Sbjct 194064 TGGACCTCGCCCGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCA 194005
Query 24552 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGT-CTGGT--GTTAGTTTATTCCAA 24608
||||| |||| || || || ||||| || || | || || | | || |||||
Sbjct 194004 AAAAAGGCCAGGACGTGCGAGATGAAATACTTCTCATCCTTGTTCATGCGGTTGTTCCAG 193945
Query 24609 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 24668
|| | || ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 193944 TCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAAGACGCCTCGGCCTTC 193885
Query 24669 TTATACATATTCCAGAT 24685
|| ||||| | ||||||
Sbjct 193884 TTGTACATCTGCCAGAT 193868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593717584957680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |