Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq180 114 2e-20
>seq180
Length=32333
Score = 114 bits (126), Expect = 2e-20
Identities = 134/181 (74%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730
|| ||| | || ||| | || ||||||| | ||| ||||||||||| |||| ||||||
Sbjct 8928 CACCTGCACCTGCAGCGCGTCGACGTGGTCGGCGTACACGTGCGCGTCGCCCATGACGTG 8987
Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790
| | | ||||| |||| | ||| | |||| ||||| || ||||| |||||
Sbjct 8988 CGTCAGGCTGCCGGGTACGAGATCGGTGGCACGCGCGAGCATGTGCGTGAGCAGCGAGTA 9047
Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850
||| |||||||||||||| || || |||||||| | |||||||||||| || |||||
Sbjct 9048 CGAGGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCACGAGCGCTGGTAGAGTTGGCA 9107
Query 145851 G 145851
|
Sbjct 9108 G 9108
Score = 109 bits (120), Expect = 6e-19
Identities = 189/273 (69%), Gaps = 4/273 (1%)
Strand=Plus/Plus
Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055
||||| || |||||||| ||| ||| || |||| | || || ||| | || || ||
Sbjct 9349 AGCTGATCGACGCCCTGACCCGTGTAGTCCGTCTGCGCATCGACATACTCTGCGCCAAAA 9408
Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115
|||| ||||||||||||||| ||||| |||| || || ||| ||| ||||| ||
Sbjct 9409 TGCCGCCACTGGAACCCGTACACGGGGCCCAAATCGCCCTCAGCCCGGTGGCCCAGGCCC 9468
Query 146116 GCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGG 146173
| | | ||||| | | || ||||| ||| ||||||||||||||| ||| | |||| |
Sbjct 9469 ACGCTGTCGAGGTACGCGCGCGACCCATTGCCGTCCCAGATCTTGATGCCGGCTTCGCTG 9528
Query 146174 AGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCC 146233
|| | | || |||| ||| |||||||| |||||||| | | || | |
Sbjct 9529 AGCGGT--AGCGACGACGTGCTGCCCTCAATGAACCACAGCAGCTCGGCAATCACGGCGC 9586
Query 146234 TCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
|||||| | || |||||||| || ||||
Sbjct 9587 GTGTGAAGACGCGTTTCGTGGTCAGGAGTGGGA 9619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590072809605640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |