Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq180 114 2e-20 >seq180 Length=32333 Score = 114 bits (126), Expect = 2e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 || ||| | || ||| | || ||||||| | ||| ||||||||||| |||| |||||| Sbjct 8928 CACCTGCACCTGCAGCGCGTCGACGTGGTCGGCGTACACGTGCGCGTCGCCCATGACGTG 8987 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 | | | ||||| |||| | ||| | |||| ||||| || ||||| ||||| Sbjct 8988 CGTCAGGCTGCCGGGTACGAGATCGGTGGCACGCGCGAGCATGTGCGTGAGCAGCGAGTA 9047 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 ||| |||||||||||||| || || |||||||| | |||||||||||| || ||||| Sbjct 9048 CGAGGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCACGAGCGCTGGTAGAGTTGGCA 9107 Query 145851 G 145851 | Sbjct 9108 G 9108 Score = 109 bits (120), Expect = 6e-19 Identities = 189/273 (69%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 ||||| || |||||||| ||| ||| || |||| | || || ||| | || || || Sbjct 9349 AGCTGATCGACGCCCTGACCCGTGTAGTCCGTCTGCGCATCGACATACTCTGCGCCAAAA 9408 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115 |||| ||||||||||||||| ||||| |||| || || ||| ||| ||||| || Sbjct 9409 TGCCGCCACTGGAACCCGTACACGGGGCCCAAATCGCCCTCAGCCCGGTGGCCCAGGCCC 9468 Query 146116 GCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGG 146173 | | | ||||| | | || ||||| ||| ||||||||||||||| ||| | |||| | Sbjct 9469 ACGCTGTCGAGGTACGCGCGCGACCCATTGCCGTCCCAGATCTTGATGCCGGCTTCGCTG 9528 Query 146174 AGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCC 146233 || | | || |||| ||| |||||||| |||||||| | | || | | Sbjct 9529 AGCGGT--AGCGACGACGTGCTGCCCTCAATGAACCACAGCAGCTCGGCAATCACGGCGC 9586 Query 146234 TCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| | || |||||||| || |||| Sbjct 9587 GTGTGAAGACGCGTTTCGTGGTCAGGAGTGGGA 9619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590072809605640