Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq90 403 2e-107
seq13 129 6e-25
seq88 114 1e-20
seq131 105 7e-18
>seq90
Length=200924
Score = 403 bits (446), Expect = 2e-107
Identities = 577/803 (72%), Gaps = 15/803 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| |||||||||||||| |||||||| | ||||||| | || |||
Sbjct 193868 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACGGCCGAGGAGATTGATCTG 193927
Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | ||| ||||| | | ||| ||||||||
Sbjct 193928 TCCAAGGATCTCCA-CGACTGGAACAACCGCATGAACAAGGATGAGAAGTATTTCATCTC 193986
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
|||||| ||||||||||| || ||| |||||||| ||||||||||| ||||| |||||
Sbjct 193987 GCACGTCCTGGCCTTTTTTGCTGCCTCGGACGGCATTGTCAACGAGAACCTGGTTGAGCG 194046
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
|||| | ||||| ||| | ||||||| || |||||||||||||| |||||| ||
Sbjct 194047 TTTCTCGGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 194106
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927
||||||| | |||||||| | ||| ||| ||||||||||||||| | | || ||
Sbjct 194107 GGAGAACATCCACTCGGAGACGTACTCGCTGCTCATCGACACGTACATCAAGGAGC-CTG 194165
Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987
| || | |||| | | ||| ||||||||||| || || || ||| || ||||
Sbjct 194166 CCCAGC-GCAGCTACCT--GTTCAACGCCATCGACACCATTCCCTGCATCCGCCGCAAGG 194222
Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047
|||| ||||| || ||||| ||| | ||| | |||| | | |||| |||||||
Sbjct 194223 CCGACTGGGCCCTCAAGTGGATTTCCGATCGCGAGTCGACCTTTGCCCAGCGTCTGGTGG 194282
Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107
|||| || |||||||||||| ||||||| |||||| || ||| |||| || |||||
Sbjct 194283 CCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCCTCCATTTTCTGGCTGC 194342
Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
|| || || || |||||||| ||||| || ||||||||| || || | ||||| |
Sbjct 194343 GCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGCGACGAAG 194402
Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227
| ||||| |||||||||||| |||| ||| ||| || | || || ||| |
Sbjct 194403 GCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACCTGAACAACCGCCCCAGCAAGA 194462
Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287
|| ||| ||| ||| |||||||||| |||| ||| || || ||||| ||||| |
Sbjct 194463 AGCTCGTTGAGGAAATCATCACCGACGCCGTCGTCATTGAAAAGGAATTCCTGACCGAGG 194522
Query 117288 CGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346
| ||||| |||| ||||| || | || ||| ||| ||| ||||| |||||
Sbjct 194523 CCCTGCC-CTGCGCCCTGCTCGGCATGAACGCCGATCTCATGAAGCAGTACATTGAGTTT 194581
Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406
||||||||| | |||||| | | || | | || |||| |||| | | | |||||
Sbjct 194582 GTCGCCGACCGTCTGCTGGTTGCCCTCGGCAACGACAAGGTCTACCGCTCCACGAACCCC 194641
Query 117407 CTGGACTTTATGAACCTCATCTC 117429
| ||||| ||| | ||||||
Sbjct 194642 TTTGACTTCATGGAGAACATCTC 194664
>seq13
Length=236849
Score = 129 bits (142), Expect = 6e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756
|| |||| || || ||||| ||||| ||||||||| |||| ||||| | | || | |
Sbjct 136030 TAGTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAAGTCGAGTCGTCGGATACCA 135971
Query 40757 TGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGA 40815
| | |||| ||||| || || | ||||| |||||||| || |||||||||| ||
Sbjct 135970 TCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGT 135912
Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875
| || | ||| ||||| ||||| || || | ||||| ||| |||||||||||||||
Sbjct 135911 TTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCTCGGACTACAACATCCAG 135852
Query 40876 AAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
|||||| | || ||||| || ||| |||||
Sbjct 135851 AAGGAGTCTACTCTGCACCTGGTGCTGCGC 135822
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || ||||| |||||||| | || || || || |
Sbjct 135581 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCG 135522
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| || || | ||||| |||||||| ||| ||||||||
Sbjct 135521 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 135462
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || || || |||||||| || | ||||| || ||||||||||
Sbjct 135461 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACACTGTCCGACTACAAC 135402
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| | || ||||| || || |||| || | ||||||
Sbjct 135401 ATCCAGAAGGAGTCGACCCTGCACCTGGTTCTGCGTCTGCGTGGCGGC 135354
Score = 123 bits (136), Expect = 3e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || ||||| |||||||| | || || || || |
Sbjct 135809 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCG 135750
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| || || | ||||| |||||||| || ||||||||
Sbjct 135749 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 135690
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | ||| ||||| ||||| || || | ||||| ||| |||||||||
Sbjct 135689 CAGCGTCTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCTCGGACTACAAC 135630
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
|||||||||||| | || ||||| || ||| |||||
Sbjct 135629 ATCCAGAAGGAGTCTACTCTGCACCTGGTGCTGCGC 135594
Score = 118 bits (130), Expect = 1e-21
Identities = 143/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772
|||||||| ||||||||| | || || ||| | |||||| | | |||| |||||
Sbjct 136297 ACGGGCAAGACCATCACCCTTGAGGTGGAATCTTCCGACACTATCGACAACG-TCAAGTC 136239
Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832
|| || | ||||| ||||| ||||| |||||||||| || || |||| || || ||
Sbjct 136238 GAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGCCTGATCTTTGCTGGTAA 136179
Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|||||||| || | ||||| || |||||||||||||||||||||| | || || ||
Sbjct 136178 GCAGCTGGAGGATGGCCGCACACTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCA 136119
Query 40893 TCTAGTGTTGCG 40904
|| ||| ||||
Sbjct 136118 CCTTGTGCTGCG 136107
>seq88
Length=56780
Score = 114 bits (126), Expect = 1e-20
Identities = 141/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || || ||||| || || || ||| |||| || || ||
Sbjct 28097 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 28156
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | ||||| || || | || || |||||||| ||| ||||
Sbjct 28157 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 28216
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| ||||| |||||||| || | ||||| || |||||||
Sbjct 28217 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTAC 28276
Query 40867 AACATCCAGAAGG 40879
|||||||||||||
Sbjct 28277 AACATCCAGAAGG 28289
>seq131
Length=44026
Score = 105 bits (116), Expect = 7e-18
Identities = 134/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| | || ||||| || | |||| |
Sbjct 31279 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 31338
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||| ||| |||||||||| || ||
Sbjct 31339 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCT 31397
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| || ||||| ||||| || || | ||||| || |||||||||||| |||||
Sbjct 31398 GATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATTCAGAA 31457
Query 40878 GG 40879
||
Sbjct 31458 GG 31459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515215715830160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |