Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq90 129 5e-25
seq13 129 5e-25
seq88 123 2e-23
seq131 111 1e-19
>seq90
Length=200924
Score = 129 bits (142), Expect = 5e-25
Identities = 352/533 (66%), Gaps = 21/533 (4%)
Strand=Plus/Plus
Query 44778 TCGAGAATATGCCCTGCGTGCGCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGATG 44837
|||| | || |||||| | ||| | |||||||| ||||| | |||| ||| ||||
Sbjct 194193 TCGACACCATTCCCTGCATCCGCCGCAAGGCCGACTGGGCCCTCAAGTGGATTTCCGATC 194252
Query 44838 AAAAGATAACTTTGGCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTT 44897
|| || || ||| | || |||| || || ||| ||||| || | ||||| |
Sbjct 194253 GCGAGTCGACCTTTGCCCAGCGTCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCT 194312
Query 44898 CGGGGAGTTTTGCGGCGATATTTTACATGAAAACCAAGGGAG---TGATGCCCGGACTGA 44954
|||| ||||| | || || | || |||| | | |||||||||| ||||
Sbjct 194313 CGGGCGCCTTTGCCTCCATTTTCTGGCTGCG---CAAGCGTGGTCTGATGCCCGGTCTGA 194369
Query 44955 CGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCT-C 45013
| ||| |||||| |||||||| | |||||||| ||||||||| ||||||||||||| |
Sbjct 194370 CCTTTTCCAACGAGCTGATTTCGCGCGACGAAGGCCTGCACACCGACTTTGCCTGCCTGC 194429
Query 45014 TACTATAATACGAGAGTCGA--TCAAAAGTTGGACGCGCCCACCGTCAACGACATGTTCT 45071
| | | || || | | | || || || ||| | || || ||
Sbjct 194430 TCTTCTCGCACCTGA-ACAACCGCCCCAGCAAGAAGC-----TCGTTGAGGAAATCATCA 194483
Query 45072 CCGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGG 45131
|||| ||||| | ||| || | |||||| | | ||||| |||||| | || | |
Sbjct 194484 CCGACGCCGTCGTCATTGAAAAGGAATTCCTGACCGAGGCCCTGCCCTGCGCCCTGCTCG 194543
Query 45132 GAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGT-- 45189
| |||||||| || | |||| |||||||||||||||||||||| ||||| || ||
Sbjct 194544 GCATGAACGCCGATCTCATGAAGCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTG 194603
Query 45190 -CCAGTTAAAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATA 45248
|| || | |||| | ||| | |||||| || || || ||| | || |
Sbjct 194604 CCCTCGGCAACGA---CAAGGTCTACCGCTCCACGAACCCCTTTGACTTCATGGAGAACA 194660
Query 45249 TTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATACAAG 45301
| ||| ||| ||||| || || || |||||||| || || | ||| ||| ||
Sbjct 194661 TCTCGCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTTGCCGACTACCAG 194713
>seq13
Length=236849
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || |||||||| ||| || ||||| ||||||
Sbjct 135373 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGGCCATCCTCC 135432
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| |||| ||||||||||| || || || ||||||||||||||
Sbjct 135433 AGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 135492
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||||| | ||| ||||| | || | || |||
Sbjct 135493 ATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATGGTCTTG 135552
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| ||||| || ||||| ||||||||
Sbjct 135553 CCGGTAAGAGTCTTGACAAAGATCTGCAT 135581
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | || ||||| ||| | |||||||| || || |||||||| ||
Sbjct 135581 TACCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCG 135640
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||||| ||| || ||||| || |||||| | || ||||||||||| || ||||
Sbjct 135641 AGAGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAG 135700
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||||||||| || || || || | |||| |||||||| | ||| |
Sbjct 135701 GAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCA 135760
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || |||||||| ||||| || ||||| ||||||||
Sbjct 135761 CCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | || ||||| ||| | |||||||| || || |||||||| ||
Sbjct 135809 TACCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCG 135868
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||||| ||| || ||||| || |||||| | || | ||||||||| || ||||
Sbjct 135869 AGAGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAG 135928
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||||||||| || || || || | |||| ||| |||| |||||
Sbjct 135929 GAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGA 135988
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
| |||| ||| | || |||||||| || || || ||
Sbjct 135989 CTTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 136025
Score = 96.9 bits (106), Expect = 3e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | || ||| | ||||| |||||||| || || |||||||| |||
Sbjct 136093 TACCACCACGGAGACGCAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGG 136152
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||||| |||||| ||||| || ||||| |||| || |||||||| || ||||
Sbjct 136153 ACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAG 136212
Query 118630 GTATGCCCTCCTTGTC 118645
| || |||||||||||
Sbjct 136213 GGATACCCTCCTTGTC 136228
>seq88
Length=56780
Score = 123 bits (136), Expect = 2e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| || |||||| |||||| ||||| || |||||| ||||
Sbjct 28287 TTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 28228
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| ||||||||||| || || ||||||||||| || || || || || | |||
Sbjct 28227 AGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 28168
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| |||||||| | ||| ||||||| ||| | ||| || || || || || || || |||
Sbjct 28167 ATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 28108
Query 118731 ATCTGCAT 118738
||||||||
Sbjct 28107 ATCTGCAT 28100
>seq131
Length=44026
Score = 111 bits (122), Expect = 1e-19
Identities = 136/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| ||||||||||| ||| || |||||| |||||| ||||| || ||||| ||||
Sbjct 31457 TTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATC 31398
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
||||||||||| || || || |||||||||||||| || || || || | |||
Sbjct 31397 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 31338
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| ||||||| | ||||||||| | ||| | || || || ||||| || || || |||
Sbjct 31337 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 31278
Query 118731 ATCTGC 118736
| |||
Sbjct 31277 CTGTGC 31272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433827539566372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |