Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq238 87.8 4e-12 >seq238 Length=23025 Score = 87.8 bits (96), Expect = 4e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 ||| || ||| |||| | |||| || || || || |||||||| || || || || || Sbjct 6375 CCTGCCGCATCTGCTGCTGTACGGCCCGCCGGGCACGGGCAAGACATCTACGATTCTCGC 6316 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 |||||| || | | | ||| | ||||||| | || ||||| ||||||||||| Sbjct 6315 GCTGGCGCGGCGCATCTACGGCACGCAGAACATGCGGCAGATGGTGCTGGAGCTGAACGC 6256 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| || || | ||||| || ||||| |||||||||| || Sbjct 6255 ATCGGACGACCGTGGCATTGACGTGGTGCGCGAGCAGATCAAGACGTT 6208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073758957121088