Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq13 120 2e-22
seq88 93.3 3e-14
>seq13
Length=236849
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||| |||||||||||| |||| ||| | || |||
Sbjct 135373 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGGCCATCCTCC 135432
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || |||| ||||| ||||| || || | ||||||||||||
Sbjct 135433 AGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 135492
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||||||||||| || || ||||||
Sbjct 135493 ATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATGGTCTTG 135552
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || |||||||| |||||||| |||||
Sbjct 135553 CCGGTAAGAGTCTTGACAAAGATCTGCAT 135581
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||| ||||||||||| || |||| | || ||
Sbjct 135601 ACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCATCTTCA 135660
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| ||||| ||||| ||||| | ||||||||||||
Sbjct 135661 AGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 135720
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||||||||||| || || ||||||
Sbjct 135721 ATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATGGTCTTG 135780
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || |||||||| |||||||| |||||
Sbjct 135781 CCGGTAAGAGTCTTGACAAAGATCTGCAT 135809
Score = 91.5 bits (100), Expect = 1e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| |||| ||| | || ||||| || || || || ||
Sbjct 136130 CTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAA 136189
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|||| ||||| ||||| ||||| | ||||||||||||| || || ||| ||
Sbjct 136190 GATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTT 136249
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCA 45314
| | |||| | |||||||| | ||| || |||||||||||||
Sbjct 136250 GTCGATAGTGTCGGAAGATTCCACCTCAAGGGTGATGGTCTTGCCCGTCA 136299
Score = 86.0 bits (94), Expect = 5e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||| ||||||||||| || |||| | || ||
Sbjct 135829 ACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCATCTTCA 135888
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || ||||| ||||| ||||| ||||| ||||| | ||||||||||||
Sbjct 135889 AGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 135945
>seq88
Length=56780
Score = 93.3 bits (102), Expect = 3e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206
||||||| |||||||||||| ||| ||| | || ||||| || || || ||||| |
Sbjct 28289 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 28230
Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266
||| ||||| || || || || | |||||||| ||| || || ||| ||
Sbjct 28229 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 28170
Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326
| | | ||||| ||| ||||| | |||||||||||| ||||| || ||||| || |
Sbjct 28169 CGATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGA 28110
Query 45327 AGATTTGCATGTTG 45340
| || ||||| |||
Sbjct 28109 AAATCTGCATCTTG 28096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395072595096361
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |