Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq21 100 6e-16
seq90 89.7 1e-12
>seq21
Length=78807
Score = 100 bits (110), Expect = 6e-16
Identities = 182/260 (70%), Gaps = 6/260 (2%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || || || |||||||||| || || ||| |||||||| ||||| |||
Sbjct 61063 CCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCC 61004
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGT 94904
|| || || || | | | | | |||||||| || || || |||| || | | ||
Sbjct 61003 TCGATCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGATGACAGCTGGGCCTGGGGC-GT 60945
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| || ||||| ||||| || || ||||| || | | ||||||||||| | ||
Sbjct 60944 ACCAGCGTTGAACAGAGTGGGCGAGGCGTGGGTGAAGAACTTGCTCGACATGAGGTTGTA 60885
Query 94965 TGTTTCAATGACA-GATTTGATGTCTG-ATCCGTGAATGCCGACAGCCACACGCATAATC 95022
|| ||||| ||| || | | |||| || |||||| ||||||||||||||||||
Sbjct 60884 CGTCTCAATAACACGA--TCAACTCTGTCGCCCCAAATGCCAACAGCCACACGCATAATC 60827
Query 95023 ATGTCCTGAGGGCGCTCAAC 95042
|||| ||| || ||||| ||
Sbjct 60826 ATGTGCTGGGGACGCTCGAC 60807
>seq90
Length=200924
Score = 89.7 bits (98), Expect = 1e-12
Identities = 286/446 (64%), Gaps = 21/446 (5%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| |||||||| || || || || |||||||| || || || || ||||||||||||
Sbjct 194279 GTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCCTCCATTTTCTGG 194338
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || | ||| | |||| ||||| |||| ||||| ||| | ||||| | |||
Sbjct 194339 CTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGCGAC 194398
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGT---------TGAAAAAGGGTTTTGTT 102088
||||| || || ||||||||| ||| |||| | |||| || |
Sbjct 194399 GAAGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACCTGAACAACCG------- 194451
Query 102089 GATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAA 102148
||||| ||||| | || ||||| |||| || |||||| |||||| |
Sbjct 194452 ----CCCCAGCAAGA-AGCTCGTTGAGGAAATCATCACCGACGCCGTCGTCATTGAAAAG 194506
Query 102149 GAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGC 102208
||||| || || | ||||||| | | || |||||| | | | ||||
Sbjct 194507 GAATTCCTGACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGATCTCATGAAG 194566
Query 102209 CAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTAT 102268
||||||||||| ||||| || || || |||||| | || || ||| |||
Sbjct 194567 CAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCCCTCGGCAACGACAAGGTCTAC 194626
Query 102269 AATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTT 102328
|| |||||||| |||||||| || || || || | |||||||||||
Sbjct 194627 CGCTCCACGAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGCAAGACCAACTTC 194686
Query 102329 TTTGAAAAGAGAGTCGCCGAGTATCA 102354
||||| ||| | || ||||| || ||
Sbjct 194687 TTTGAGAAGCGTGTTGCCGACTACCA 194712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989577140636655
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |