Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq21 100 6e-16 seq90 89.7 1e-12 >seq21 Length=78807 Score = 100 bits (110), Expect = 6e-16 Identities = 182/260 (70%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || || |||||||||| || || ||| |||||||| ||||| ||| Sbjct 61063 CCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCC 61004 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGT 94904 || || || || | | | | | |||||||| || || || |||| || | | || Sbjct 61003 TCGATCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGATGACAGCTGGGCCTGGGGC-GT 60945 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| || ||||| ||||| || || ||||| || | | ||||||||||| | || Sbjct 60944 ACCAGCGTTGAACAGAGTGGGCGAGGCGTGGGTGAAGAACTTGCTCGACATGAGGTTGTA 60885 Query 94965 TGTTTCAATGACA-GATTTGATGTCTG-ATCCGTGAATGCCGACAGCCACACGCATAATC 95022 || ||||| ||| || | | |||| || |||||| |||||||||||||||||| Sbjct 60884 CGTCTCAATAACACGA--TCAACTCTGTCGCCCCAAATGCCAACAGCCACACGCATAATC 60827 Query 95023 ATGTCCTGAGGGCGCTCAAC 95042 |||| ||| || ||||| || Sbjct 60826 ATGTGCTGGGGACGCTCGAC 60807 >seq90 Length=200924 Score = 89.7 bits (98), Expect = 1e-12 Identities = 286/446 (64%), Gaps = 21/446 (5%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || |||||||| || || || || |||||||| || || || || |||||||||||| Sbjct 194279 GTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCCTCCATTTTCTGG 194338 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || | ||| | |||| ||||| |||| ||||| ||| | ||||| | ||| Sbjct 194339 CTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGCGAC 194398 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGT---------TGAAAAAGGGTTTTGTT 102088 ||||| || || ||||||||| ||| |||| | |||| || | Sbjct 194399 GAAGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACCTGAACAACCG------- 194451 Query 102089 GATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAA 102148 ||||| ||||| | || ||||| |||| || |||||| |||||| | Sbjct 194452 ----CCCCAGCAAGA-AGCTCGTTGAGGAAATCATCACCGACGCCGTCGTCATTGAAAAG 194506 Query 102149 GAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGC 102208 ||||| || || | ||||||| | | || |||||| | | | |||| Sbjct 194507 GAATTCCTGACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGATCTCATGAAG 194566 Query 102209 CAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTAT 102268 ||||||||||| ||||| || || || |||||| | || || ||| ||| Sbjct 194567 CAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCCCTCGGCAACGACAAGGTCTAC 194626 Query 102269 AATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTT 102328 || |||||||| |||||||| || || || || | ||||||||||| Sbjct 194627 CGCTCCACGAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGCAAGACCAACTTC 194686 Query 102329 TTTGAAAAGAGAGTCGCCGAGTATCA 102354 ||||| ||| | || ||||| || || Sbjct 194687 TTTGAGAAGCGTGTTGCCGACTACCA 194712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577140636655