Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq21 127 3e-24
>seq21
Length=78807
Score = 127 bits (140), Expect = 3e-24
Identities = 450/699 (64%), Gaps = 18/699 (3%)
Strand=Plus/Minus
Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280
||| || || | || ||||||| | ||| || || | || || || ||||| ||
Sbjct 61388 AGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCGAGTTCTTCTCAACACGCTTCATGAA 61329
Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
||| ||||| ||||| || || | || || || | | | ||||| || ||
Sbjct 61328 GAGGTCAGGGATCCACAGCGCCAGGAAAAGGTCACGGGCGCGGACCTCCTCCTTGCCGTG 61269
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
||||| || || ||||| | | | ||| | |||||||| |||| ||| |||||
Sbjct 61268 GTTCTTGCGCAGGTCAAGGAAGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGGC 61209
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| | ||||| || ||||| || |||||||| | ||| | || ||||| || | ||
Sbjct 61208 AAAGGCACCAGGGCGCTTGTTGCCGCCCTGATCGACGTAGCGGGCAGTGTTGTTGAACAC 61149
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
| || ||| ||||| |||||||| || |||| ||||| |||| || || ||| |
Sbjct 61148 ACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAGCCAGT 61089
Query 63521 GGCACGAAT---ATT-ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63576
|||||| || || || ||||| | || || || || ||||| || ||||| | |
Sbjct 61088 GGCACGGATGCGATGGAC--ATTGA--GTCCGATACCACCGGCCATCTTGGAGATCATAG 61033
Query 63577 CGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAA 63636
| || || | || || || ||||| || || || || |||||| || || |
Sbjct 61032 CACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGA 60973
Query 63637 AACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63696
| || |||| ||| | | || || || || || | || || || ||||| |
Sbjct 60972 AGCAAGATGACAGCTGGGCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGGG 60913
Query 63697 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC-----TGAGTCTATATCCCA 63751
| || | || || | || ||||||||||||||| | | ||| | |||
Sbjct 60912 TGAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATAACACGATCAACTCTGTCGCCC- 60854
Query 63752 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTT 63811
||| || || || |||||||| | ||||||||| || | || ||||| |||
Sbjct 60853 ----CAAATGCCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCC 60798
Query 63812 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 63871
|| || |||| || ||| || || | ||| || || ||||| || | ||| ||
Sbjct 60797 GTCTAGCTTCAGCAGGTACGAACGCTCTAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAA 60738
Query 63872 GTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
||| || ||||| | ||| | || | |||| |||||
Sbjct 60737 GTCACGGTCGTACACAATGGCAGAGTCCAGCTCTTCCTT 60699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629813340858480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |