Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq21 136 5e-27
>seq21
Length=78807
Score = 136 bits (150), Expect = 5e-27
Identities = 453/701 (65%), Gaps = 18/701 (3%)
Strand=Plus/Minus
Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071
||||| || || | || ||||||| | ||| || || | || || || |||||
Sbjct 61390 CCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCGAGTTCTTCTCAACACGCTTCATG 61331
Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
||||| ||||| ||||| || || | || | || | || | ||||| || ||
Sbjct 61330 AAGAGGTCAGGGATCCACAGCGCCAGGAAAAGGTCACGGGCGCGGACCTCCTCCTTGCCG 61271
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
||||| || || ||||| | | | ||| |||||||| |||| ||| |||
Sbjct 61270 TGGTTCTTGCGCAGGTCAAGGAAGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATG 61211
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | ||||| || ||||| || |||||||| | ||| | || ||||| || |
Sbjct 61210 GCAAAGGCACCAGGGCGCTTGTTGCCGCCCTGATCGACGTAGCGGGCAGTGTTGTTGAAC 61151
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|| | || ||| ||||| ||||| ||||| ||||| ||||| |||| || || |||
Sbjct 61150 ACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAGCCA 61091
Query 66312 CTTGCACGAAT---ATT-ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 66367
| ||||| || || || ||||| | || || || || ||||| || ||||| |
Sbjct 61090 GTGGCACGGATGCGATGGAC--ATTGA--GTCCGATACCACCGGCCATCTTGGAGATCAT 61035
Query 66368 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 66427
|| || || | ||||| || |||||||| || || ||| |||||| || ||
Sbjct 61034 AGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAG 60975
Query 66428 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 66487
|| || |||| ||| | || || || || || | || || || |||||
Sbjct 60974 GAAGCAAGATGACAGCTGGGCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTG 60915
Query 66488 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC-----TGAGTCTATATCC 66542
|| || | || || | || ||||||||||||||| | | ||| | ||
Sbjct 60914 GGTGAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATAACACGATCAACTCTGTCGCC 60855
Query 66543 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 66602
| ||| || || || |||||||| | ||||||||| || | || || ||||||
Sbjct 60854 C-----CAAATGCCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTG 60800
Query 66603 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 66662
|| || |||| || ||| || || | ||| || || ||||| || | |||
Sbjct 60799 CCGTCTAGCTTCAGCAGGTACGAACGCTCTAGAGTCTTGAAGCCAAAGTACTGGTAGTTG 60740
Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703
||||| || ||||| | ||| | |||| || | |||||
Sbjct 60739 AAGTCACGGTCGTACACAATGGCAGAGTCCAGCTCTTCCTT 60699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658168349106440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |