Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq21 136 5e-27 >seq21 Length=78807 Score = 136 bits (150), Expect = 5e-27 Identities = 453/701 (65%), Gaps = 18/701 (3%) Strand=Plus/Minus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 ||||| || || | || ||||||| | ||| || || | || || || ||||| Sbjct 61390 CCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCGAGTTCTTCTCAACACGCTTCATG 61331 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 ||||| ||||| ||||| || || | || | || | || | ||||| || || Sbjct 61330 AAGAGGTCAGGGATCCACAGCGCCAGGAAAAGGTCACGGGCGCGGACCTCCTCCTTGCCG 61271 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 ||||| || || ||||| | | | ||| |||||||| |||| ||| ||| Sbjct 61270 TGGTTCTTGCGCAGGTCAAGGAAGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATG 61211 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | ||||| || ||||| || |||||||| | ||| | || ||||| || | Sbjct 61210 GCAAAGGCACCAGGGCGCTTGTTGCCGCCCTGATCGACGTAGCGGGCAGTGTTGTTGAAC 61151 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 || | || ||| ||||| ||||| ||||| ||||| ||||| |||| || || ||| Sbjct 61150 ACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAGCCA 61091 Query 66312 CTTGCACGAAT---ATT-ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 66367 | ||||| || || || ||||| | || || || || ||||| || ||||| | Sbjct 61090 GTGGCACGGATGCGATGGAC--ATTGA--GTCCGATACCACCGGCCATCTTGGAGATCAT 61035 Query 66368 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 66427 || || || | ||||| || |||||||| || || ||| |||||| || || Sbjct 61034 AGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAG 60975 Query 66428 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 66487 || || |||| ||| | || || || || || | || || || ||||| Sbjct 60974 GAAGCAAGATGACAGCTGGGCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTG 60915 Query 66488 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC-----TGAGTCTATATCC 66542 || || | || || | || ||||||||||||||| | | ||| | || Sbjct 60914 GGTGAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATAACACGATCAACTCTGTCGCC 60855 Query 66543 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 66602 | ||| || || || |||||||| | ||||||||| || | || || |||||| Sbjct 60854 C-----CAAATGCCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTG 60800 Query 66603 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 66662 || || |||| || ||| || || | ||| || || ||||| || | ||| Sbjct 60799 CCGTCTAGCTTCAGCAGGTACGAACGCTCTAGAGTCTTGAAGCCAAAGTACTGGTAGTTG 60740 Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703 ||||| || ||||| | ||| | |||| || | ||||| Sbjct 60739 AAGTCACGGTCGTACACAATGGCAGAGTCCAGCTCTTCCTT 60699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168349106440