Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq180 114 1e-20
>seq180
Length=32333
Score = 114 bits (126), Expect = 1e-20
Identities = 211/302 (70%), Gaps = 8/302 (3%)
Strand=Plus/Plus
Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168
|||||||||||| | |||| | |||||| || || || |||||| | | ||||| |
Sbjct 9222 CACGTAAAACTG-CGCAAACATGTGACACGGTGGCAGCGCCATCTTCTTCAAATCCGCCG 9280
Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCA 21228
| |||||||| | ||| | |||||| ||||||| || | || | | |||||
Sbjct 9281 GATTCCACGCACTCATGATGATGCGTCGATCGTACGGAGTATTCTTCAGCTTGTGCACCA 9340
Query 21229 CGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTG--TACTC 21286
| | |||||| || || ||||||||| ||||| |||| || | | |||||
Sbjct 9341 CCTCCGCCAGCTGATCGACGCCCTGACCCGTGTAGTC--CGTCTGCGCATCGACATACTC 9398
Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTC 21346
|| |||||||| | |||||||||||||||||| || |||| ||||||||| ||||
Sbjct 9399 TGCGCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCCAAATCGCCCTCAGCCCGGTG 9458
Query 21347 CCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGC 21405
|| | |||| ||| | | | | ||||| ||||| | ||||||| || || | ||
Sbjct 9459 GCCCAGGCCC-ACGCTGTCGAGGTACGCGCGCGACCCATTGCCGTCCCAGATCTTGATGC 9517
Query 21406 CG 21407
||
Sbjct 9518 CG 9519
Score = 82.4 bits (90), Expect = 7e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936
||||| ||| |||| |||| ||||| | | ||| ||| | | |||| | || |||
Sbjct 8893 ATCTTGAGCAGCGGGAACGCGCGCGGCTCGCGCTGCACCTGCACCTGCAGCGCGTCGACG 8952
Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC-AGGCC 20995
|||| | ||| ||||| ||||| |||| | |||| | | || ||||| | || |
Sbjct 8953 TGGTCGGCGTACACGTGCGCGTCGCCCATGACGTGCGTCAGG-CTGCCGGGTACGAGATC 9011
Query 20996 CGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCC 21055
||| | | |||| || | ||| || || | ||| ||| ||||| || || || ||
Sbjct 9012 GGTGGCACGCGCGAGCATGTGCGTGAGCAGCGAGTACGAGGCAATGTTGAAGGGCACGCC 9071
Query 21056 GAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092
||||||||||||| || | |||||| || ||||||
Sbjct 9072 GAGGCCCATGTCGCACGAGCGCTGGTAGAGTTGGCAG 9108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427773179485680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |