Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq90 118 8e-22
>seq90
Length=200924
Score = 118 bits (130), Expect = 8e-22
Identities = 286/426 (67%), Gaps = 14/426 (3%)
Strand=Plus/Plus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
||||| |||||||||| || || || ||| || | || || || | ||||| ||||
Sbjct 194273 CGTCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCCTCCATT 194332
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
||||||||| || ||| || ||||| || || | |||||||||||| |||||
Sbjct 194333 TTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCG 194392
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920
|| |||||||| || ||| |||||||| || |||| || ||| || ||| ||
Sbjct 194393 CGCGACGAAGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACCTG---AAC-AA 194448
Query 22921 CCGTGTCAGGACGATGCAC----ATCAAATCATATCTGATGCCGTTGACATTGAGACGGC 22976
||| ||| | || || | | ||||||| | || ||||| | |||||| | ||
Sbjct 194449 CCGCCCCAGCAAGAAGCTCGTTGAGGAAATCATCACCGACGCCGTCGTCATTGAAAAGGA 194508
Query 22977 TTTCTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACT 23036
||| | ||||| || |||| || || ||||| || |||| |
Sbjct 194509 ATTCCTGACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGATCTCATGAAGCA 194568
Query 23037 GTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAA 23096
|||||| ||||||| || || || ||||| | |||||| || | | ||| || ||
Sbjct 194569 GTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCCCTCGGCAACGACAAG--GTCTAC 194626
Query 23097 CGTT--GCCAATCCATTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAAACTT 23153
|| | | || || ||||| |||||||| ||||| | || | | || || || |||||
Sbjct 194627 CGCTCCACGAACCCCTTTGACTTCATGGAGAACATCTCGC-TGGGCGGCAAGACCAACTT 194685
Query 23154 CTTTGA 23159
||||||
Sbjct 194686 CTTTGA 194691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356231251196023
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |