Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq13 114 1e-20
>seq13
Length=236849
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|||||||| || | ||||| ||| | ||| | || ||||| || || ||||| || |||
Sbjct 135352 TGGCCGCCACGCAGACGCAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCG 135411
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|| ||||| || || ||||| ||||||||| |||||||||| ||||| || ||
Sbjct 135412 GACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGG 135471
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714
|| ||||| || ||||| ||| || || | | || | ||||| | || ||||
Sbjct 135472 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCC 135531
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| | || | ||||||||||| | || || || || || ||||||
Sbjct 135532 ACCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCATA 135582
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || | ||| | |||||||| || || ||||| || || | ||||
Sbjct 135595 CGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCA 135654
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || ||||| | |||||||| ||||| || ||||| ||||| || |||
Sbjct 135655 TCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTG 135714
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | ||||| | || ||||||||| | || |
Sbjct 135715 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATG 135774
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||||||||| | || || || || || ||||||
Sbjct 135775 GTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCATA 135810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496060645367200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |