Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq21 149 9e-31 seq90 145 1e-29 >seq21 Length=78807 Score = 149 bits (164), Expect = 9e-31 Identities = 457/701 (65%), Gaps = 18/701 (3%) Strand=Plus/Minus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 ||||| || |||| || ||||||| | ||| || | | || || || ||||| Sbjct 61390 CCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCGAGTTCTTCTCAACACGCTTCATG 61331 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 ||||| ||||| ||||| || || | || || || | || | |||||| || || Sbjct 61330 AAGAGGTCAGGGATCCACAGCGCCAGGAAAAGGTCACGGGCGCGGACCTCCTCCTTGCCG 61271 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| || || ||||| | | | ||| | |||||||| |||| ||| ||| Sbjct 61270 TGGTTCTTGCGCAGGTCAAGGAAGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATG 61211 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | || || || ||||| || |||||||| | ||| | || ||||| || | Sbjct 61210 GCAAAGGCACCAGGGCGCTTGTTGCCGCCCTGATCGACGTAGCGGGCAGTGTTGTTGAAC 61151 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | || ||| ||||| ||||| ||||| ||||| ||||| |||| || || ||| Sbjct 61150 ACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAGCCA 61091 Query 80191 CTGGCACGAAT---ATT-ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246 ||||||| || || || ||||| | || || || || ||||| || ||||| | Sbjct 61090 GTGGCACGGATGCGATGGAC--ATTGA--GTCCGATACCACCGGCCATCTTGGAGATCAT 61035 Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306 || || || | ||||| || |||||||| || || || |||||| || || Sbjct 61034 AGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAG 60975 Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366 || || |||| ||| | || || || || || | || || || ||||| Sbjct 60974 GAAGCAAGATGACAGCTGGGCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTG 60915 Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGC-TGAT----TCTATATCC 80421 || || | || |||| || ||||||||||||||| | ||| ||| | || Sbjct 60914 GGTGAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATAACACGATCAACTCTGTCGCC 60855 Query 80422 CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 80481 | ||| || || || |||||||| | ||||||||| || | || || |||||| Sbjct 60854 C-----CAAATGCCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTG 60800 Query 80482 TTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 80541 | || |||| || ||| || || | ||| || || ||||| || | ||| Sbjct 60799 CCGTCTAGCTTCAGCAGGTACGAACGCTCTAGAGTCTTGAAGCCAAAGTACTGGTAGTTG 60740 Query 80542 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582 ||||| || ||||| | ||| | |||| || | ||||| Sbjct 60739 AAGTCACGGTCGTACACAATGGCAGAGTCCAGCTCTTCCTT 60699 >seq90 Length=200924 Score = 145 bits (160), Expect = 1e-29 Identities = 367/557 (66%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| |||||| || ||||| | ||| || ||||||||||| || || Sbjct 194424 CAGGCAAAGTCGGTGTGCAGGCCTTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGA 194365 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || |||||||| ||||| || ||||| ||||| | || || |||||| Sbjct 194364 CCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAG 194305 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136 || || || || ||||||||||| || || | || || | | | ||| || Sbjct 194304 ATGCCCTCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGGTCGACTCGCGATCGGAA 194245 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||||||| | ||||| |||||||| | || || || || || ||||| || Sbjct 194244 ATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTG 194185 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 || || ||| | | | || || | || || ||||| | || ||| | Sbjct 194184 AACAGGTAGCTGCGCTGGGCAGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTC 194125 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 ||||| || ||||| || || ||||| || |||||||| || | ||||||| ||| Sbjct 194124 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATC 194065 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 || || || | || || ||| | | || || || || || ||||| ||| ||| Sbjct 194064 TGGACCTCGCCCGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCA 194005 Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTT---TTCGTTGGGTGTTAGTTTATTCCAA 50433 ||||| |||| || || || |||| || || ||| | | || ||||| Sbjct 194004 AAAAAGGCCAGGACGTGCGAGATGAAATACTTCTCATCCTTGTTCATGCGGTTGTTCCAG 193945 Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 || | || ||| || || | ||| | || || | ||||| || || ||||| ||||| Sbjct 193944 TCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAAGACGCCTCGGCCTTC 193885 Query 50494 TTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 193884 TTGTACATCTGCCAGAT 193868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718263942707240