Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq21 140 4e-28
>seq21
Length=78807
Score = 140 bits (154), Expect = 4e-28
Identities = 443/678 (65%), Gaps = 14/678 (2%)
Strand=Plus/Minus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCA--TCATCATTTACTCGTTTCA 72031
||||| || || || || ||||||| | ||| || | | || || | || || ||||
Sbjct 61390 CCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTC-CGAGTTCTTC-TCAACACGCTTCA 61333
Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 72091
| ||||| ||||| ||||| || || | || || || | || | |||||| || |
Sbjct 61332 TGAAGAGGTCAGGGATCCACAGCGCCAGGAAAAGGTCACGGGCGCGGACCTCCTCCTTGC 61273
Query 72092 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 72151
| ||||| || || ||||| | | | ||| | |||||||| |||| ||| |
Sbjct 61272 CGTGGTTCTTGCGCAGGTCAAGGAAGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAA 61213
Query 72152 TGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211
|||| | | || || || ||||| || |||||||| | ||| | || ||||| ||
Sbjct 61212 TGGCAAAGGCACCAGGGCGCTTGTTGCCGCCCTGATCGACGTAGCGGGCAGTGTTGTTGA 61153
Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271
| || | || ||| ||||| ||||| ||||| | ||| ||||| |||| || || |
Sbjct 61152 ACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAGC 61093
Query 72272 CACTGGCACGAATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329
|| ||||||| || || ||||| | || || || || ||||| || ||||| |
Sbjct 61092 CAGTGGCACGGATGCGATGGACATTGA--GTCCGATACCACCGGCCATCTTGGAGATCAT 61035
Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389
|| || || | ||||| || |||||||| || || ||| |||||| || ||
Sbjct 61034 AGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAG 60975
Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449
|| || |||| ||| | || || || || || | || || || |||||
Sbjct 60974 GAAGCAAGATGACAGCTGGGCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTG 60915
Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGC-TGAT--TCTATATCCCA 72506
|| || | || |||| || ||||||||||||||| | ||| || | || |
Sbjct 60914 GGTGAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATAACACGATCAACTCTGTCGCC 60855
Query 72507 TTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTT 72566
| || || || || |||||||| | ||| ||||| || | || || ||||||
Sbjct 60854 CCAA---ATGCCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCC 60798
Query 72567 ATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 72626
| || |||| || ||| || || | ||| || || ||||| || | ||| ||
Sbjct 60797 GTCTAGCTTCAGCAGGTACGAACGCTCTAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAA 60738
Query 72627 GTCTCGTTCGTAAATAAT 72644
||| || ||||| | |||
Sbjct 60737 GTCACGGTCGTACACAAT 60720
Score = 93.3 bits (102), Expect = 6e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848
|||| ||||| || ||||| ||||| | | || || | |||||| || |||||||||
Sbjct 62584 TCCTGGTCCACAGTGAACTGGATGGGCGCAGCAGCAGCCTGCGTACGCAGGTAGTACATG 62525
Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGCT 70907
|| || || ||||| || |||| ||| ||| ||||| || || | ||| |||| |
Sbjct 62524 CCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATGCTGGTAATCTTGCCCATAG-T 62466
Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967
||| || ||||| || || | |||||| || ||||| ||||| || | ||| ||
Sbjct 62465 AGGGTCCTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATAAAGGCACCACGGTCAGC 62406
Query 70968 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 71015
|||||| | | | ||| ||| | ||| ||||| | ||| || ||
Sbjct 62405 AGCCATCTGCACAACCGTACGTTGCGAAATCTCCCACACAGTCTTGTA 62358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671134661421160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |