Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq41 100 2e-16 >seq41 Length=71150 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||| | || ||| || | |||||||| | ||| |||||||||||| | | | Sbjct 54450 GCGCTCGAGCACCAACTGAGCCACACGGTCGCCGGCCTTGACCTCGAAATCGGTATCGTT 54509 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||||| | || || | ||||||||||||||| || || ||||| ||||| Sbjct 54510 GTGGTTGAACAAGAGAACTTTGACTTCGCCGCGGTAGTCGGCATCGATGACGCCGGCGCC 54569 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 || || ||||||||| | || || || || |||||||| | |||||||| Sbjct 54570 GGTATCAATAAAGTGCTTGGCGGCAAGACCTGAACGGGGAGCAATGCGGCCGT 54622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430051564463192