Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 4e-13 >seq13 Length=236849 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || | || | || | ||||||||||||||||| | | Sbjct 135390 CTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAA 135449 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||| ||| || | | ||||||||| || || ||||| | Sbjct 135450 GATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 135509 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | ||||| || | |||||| ||| | || ||||| || ||||| ||||| || || Sbjct 135510 GTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGAC 135569 Query 48715 AAAAATCTGCAT 48726 ||| |||||||| Sbjct 135570 AAAGATCTGCAT 135581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248422506541