Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 163 4e-36
seq514 120 5e-23
>seq3
Length=94568
Score = 163 bits (180), Expect = 4e-36
Identities = 199/269 (74%), Gaps = 2/269 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| ||| || || |||||||| || ||||||||||| ||||
Sbjct 73461 CGCCAAGCGTCACCGCAAGAT-TCTCCGCGACAACATCCAGGGTATCACCAAGCCCGCTA 73519
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| |||||||||||||| ||||||||| | || | || | || || ||||
Sbjct 73520 TCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCCGCCATGATTTACGAGGAGA 73579
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| |||| | ||| ||||| || || |||| ||| || || ||| || |
Sbjct 73580 CCCGTGGTGTTCTCAAGTCGTTCCTGGAGGGTGTCATCCGTGACGCCGTCACCTACACTG 73639
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||||| || ||||| ||||| || |||| | ||||| || | || | ||||
Sbjct 73640 AGCACGCTAAGCGCAAGACCGTCACTTCGCTGGACGTTGTCTACGCTCTCAAGAGACAAG 73699
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | | || ||||| || |||||
Sbjct 73700 GCCGCACCCTGTACGGTTTCGGTGGTTAA 73728
>seq514
Length=113769
Score = 120 bits (132), Expect = 5e-23
Identities = 88/100 (88%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| |||| ||| |||||| || ||||| || || ||||||||||| || |
Sbjct 35350 CGCTAAGCGTCACCGCAAGAT-TCTTCGCGACAACATTCAGGGTATCACCAAGCCTGCCA 35292
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||||||||||||||||||||||||| ||||||||| ||||
Sbjct 35291 TCCGTCGTCTGGCTCGTCGTGGTGGTGTCAAGCGTATCTC 35252
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| ||||| ||| ||||| |||||| || ||| |||| ||||
Sbjct 35186 TGATCTACGAGGAGACTCGTGGTGTGCTGAAGTCCTTCCTGGAGGGCGTCATCCGCGATG 35127
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| |||||||| | || | ||||| |
Sbjct 35126 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTTGTCTACG 35067
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| |||| || || ||||| | | || ||||| || |||||
Sbjct 35066 CCCTGAAGCGCCAGGGCCGCACCCTGTACGGTTTCGGTGGTTAA 35023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074705359913
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |