Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq90 84.2 2e-11 >seq90 Length=200924 Score = 84.2 bits (92), Expect = 2e-11 Identities = 231/350 (66%), Gaps = 17/350 (5%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| ||| | ||||| || ||||| || || |||||||| | || || ||||| | Sbjct 194713 CTGGTAGTCGGCAACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGCGAGATGTTCTC 194654 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || || || || || | | | | | |||||||| ||| | | | || ||| Sbjct 194653 CATGAAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTGTCGTTGCCGAGGGCAACCAGCAG 194594 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || || |||||||| ||||| | |||| ||| | | |||||||| | || | Sbjct 194593 ACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGATCG-GCGTTCATGCCGAGCAGGG 194535 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC--TACAAACAT 119878 || || | || | ||| | ||| |||||||||||| |||| || || | | | Sbjct 194534 CGCAGGGCAGGGCCTCGGTCAGGAATTCCTTTTCAATGACGACGGCGTCGGTGATGATTT 194475 Query 119879 ACTCAAC-ACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATA 119937 |||||| | ||| | ||| | | |||||| | | || | || | Sbjct 194474 CCTCAACGAGCTTCTTGCTGGGGCGGTTGTTCAGGT-GCGA-----------GAAGAGCA 194427 Query 119938 GACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTG 119987 | || |||||||||||||| || |||||||| | ||||| || |||||| Sbjct 194426 GGCAGGCAAAGTCGGTGTGCAGGCCTTCGTCGCGCGAAATCAGCTCGTTG 194377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659163045520