Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq21 387 4e-102 >seq21 Length=78807 Score = 387 bits (428), Expect = 4e-102 Identities = 1137/1736 (65%), Gaps = 36/1736 (2%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCC-CGGA 363500 ||||| || || || ||||| ||| | |||||||| ||| |||| || || | || Sbjct 60804 ATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTGGCTGTTGGCATTTGGGGCGACAGA 60863 Query 363501 TGTTGATGCCGCGATTGAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCA 363559 |||||| | ||||| || || || || | | || || | ||||| |||||| Sbjct 60864 -GTTGATCGTGTTATTGAGACGTACAACCTCATGTCGAGCAAGT-TCTTCACCCACGCCT 60921 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 |||| || ||| ||| ||||| || | | | ||| |||| |||||||| || | Sbjct 60922 CGCCCACTCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCATCTTGCTTCCTGGTTG 60981 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | |||||||| || || |||||||| || | || || || |||| ||||||| | || | Sbjct 60982 ACATGAAGGAAGACTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATGATCT 61041 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTAC 363738 |||||| || || || || || | |||| | ||||| || | || || Sbjct 61042 CCAAGATGGCCGGTGGTATCGGACTCAATGTCCATCGCATCCGTGCCACTGGCTCGT-AC 61100 Query 363739 ATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 ||| |||||| || ||| || || | |||||||||| |||||||| |||| Sbjct 61101 ATTGCCGGCACCAACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAACAAC 61160 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 ||||| | |||||||| ||||| || |||||| || || ||||| || || || Sbjct 61161 ACTGCCCGCTACGTCGATCAGGGCGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTG 61220 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 ||||| || || ||| | ||||| || ||||| || || || ||| || || ||| Sbjct 61221 GAGCCGTGGCACGCGGATGTGTTTGACTTCCTTGACCTGCGCAAGAACCACGGCAAGGAG 61280 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 || | || || ||||| || ||| || || ||| | |||||| || |||||||| Sbjct 61281 GAGGTCCGCGCCCGTGACCTTTTCCTGGCGCTGTGGATCCCTGACCTCTTCATGAAGCGT 61340 Query 363979 GTGGAGGCAGGTAAGAATT-GGTC---ACTCT--TTTGCCCACACGAATGTCCAGGTCTT 364032 || ||| ||||| | || | ||||| | ||||| |||| || || || || Sbjct 61341 GTTGAG------AAGAACTCGGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTG 61394 Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092 | || | || || || | || ||||| ||||||| ||| || |||||| Sbjct 61395 GCTGACTGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAGGTACGAGCAGGAGGGCCGT 61454 Query 364093 GCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAG 364152 | || | | || || ||||||||||||| ||||| |||| | |||| ||| Sbjct 61455 GGCCGCGCGTCGATCAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCTCAGACCGAG 61514 Query 364153 ACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCAC 364212 || || | || | |||| ||||||| || || ||||||||| ||||||| || || Sbjct 61515 ACGGGCAACCCGTTTATGCTGTACAAGGACCACTGTAACCGCAAGAGCAACCAGAAGAAC 61574 Query 364213 CTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271 || || || | || |||| |||||| || ||||||||||| || ||| || ||||| Sbjct 61575 CTGGGCACCA-TCCGCAGCTCCAACCTGTGCACCGAGATTATCGAGTACTGTGCGCCCGA 61633 Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAA 364323 ||| ||||||||| ||||| || ||| | || || ||||||||||| | || Sbjct 61634 TGAGGTTGCCGTATGCAACCTGGCTTCGCTGGCTCTGCCGGCGTTTGTCGACTACAACAA 61693 Query 364324 GA--TGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATC 364381 || |||| ||| |||| | || | || || ||| | || | |||| | Sbjct 61694 GAACGAGTAC----GACTTCCAGAAGCTACACGAGGTCACCAAGGTTGTTGTGCGCAACC 61749 Query 364382 TCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGC 364441 | || | || ||| || | || || | ||||| || | || |||| Sbjct 61750 TGAACCGCATCATTGACGTCAACCACTACCCCGTGCCTGAGGCTCACAACAGCAACATGC 61809 Query 364442 GTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGA 364501 | || || || |||||| ||||||| ||||| || ||||| | ||| || ||| | Sbjct 61810 GCCACCGTCCTATTGGTGTTGGTGTCCAGGGTCTGGCTGATGCTTTCCTGGCGCTGCGCA 61869 Query 364502 TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATT 364561 || | ||||| ||| | || ||||| || || | | ||||||||||||| || || Sbjct 61870 TGCCTTTTGAGTCGGCCGAGGCTCGCAAGCTCAACACGCAGATCTTTGAAACCATCTACC 61929 Query 364562 TTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATG 364621 || || |||| || ||| ||| | || || |||| | |||||||| || | Sbjct 61930 ACGCTGCTCTGACGGCCTCGATGGATATTGCCAAGGAGGAGGGTACCTACTCTACGTACG 61989 Query 364622 AGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTG 364681 |||| || || |||| ||||| | | ||||| || | ||||||||||| || | Sbjct 61990 AGGGCTCGCCCGTTTCCCAGGGCATCCTGCAGTTCGACATGTGGAATGTCACTCCCAGCG 62049 Query 364682 TCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC 364740 || ||| |||||| |||| | | | | | ||| |||| ||| |||||||| Sbjct 62050 ACCTCTGGGACTGGGTGTCGCTCAAGGAGC-AGATCAAGCAGCACGGTGTGCGCAACTCG 62108 Query 364741 CTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGC 364800 || | ||||||||||| ||||| || | ||||| || || |||||||||||| Sbjct 62109 CTGCTGCTTGCGCCCATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGC 62168 Query 364801 TTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTA 364860 ||||| |||| || ||| | || || || || || | || || || | ||| Sbjct 62169 TTCGAGCCGTACACTTCCAACATCTACCAGCGTCGTGTGCTGGCTGGCGAGTTCCAGGTT 62228 Query 364861 GTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAG 364920 ||||| || | | ||| | ||||| || |||||| || | ||||||| Sbjct 62229 GTTAACCCGTGGTTGTTGCGTGATTTGGTCGACCTGGGTCTGTGGTCGGATAACATGAAG 62288 Query 364921 AACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTG 364980 ||| ||||| || | |||||||| || ||||| ||||| | | || || || | Sbjct 62289 AACCGCATCATTGCTGAGAATGGTTCGGTCCAGAATATTCCTAGCATCCCTGACGACATC 62348 Query 364981 AAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCC 365040 ||| | | ||||| || || ||||| ||||| || || | | | ||||| || Sbjct 62349 AAGGCGCTGTACAAGACTGTGTGGGAGATTTCGCAACGTACGGTTGTGCAGATGGCTGCT 62408 Query 365041 GATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACC 365100 || || ||||| |||||| ||| |||||| | ||| | ||||| | || || Sbjct 62409 GACCGTGGTGCCTTTATCGACCAGTCGCAGTCGCTCAACATCCACATGAAGGACCCTACT 62468 Query 365101 TCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| |||| |||||| || ||| ||||| ||||| ||||| || Sbjct 62469 ATGGGCAAGATTACCAGCATGCACTTTGCCGGCTGGAAGCTGGGTCTCAAGACGGG 62524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303344565723062