Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq90 140 3e-28 seq13 123 2e-23 seq131 109 5e-19 seq88 104 2e-17 >seq90 Length=200924 Score = 140 bits (154), Expect = 3e-28 Identities = 337/498 (68%), Gaps = 19/498 (4%) Strand=Plus/Plus Query 46106 CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGG 46165 |||||||||| | |||||||| | || |||| || ||| ||||| |||||| Sbjct 194223 CCGACTGGGCCCTCAAGTGGATTTCCGATCGCGAGTCGACCTTTGCCCAGCGTCTGGTGG 194282 Query 46166 CCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACAT-C 46224 ||||||| || |||||| |||| || || ||| |||||| |||| || | | | Sbjct 194283 CCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCCTCCATTTTCTGGCTGC 194342 Query 46225 AAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284 || | || | | |||||||| ||||| ||| |||||||||||| ||||||||||| Sbjct 194343 GCAAGCGTGGTC-TGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGCGACGAA 194401 Query 46285 GGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCG 46344 |||||||| || |||||||| || || || | | | | || || || || | Sbjct 194402 GGCCTGCACACCGACTTTGCCTGCCTGCTCT---TCTCGCACCTGAACAAC-CGCCCCAG 194457 Query 46345 CCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTA 46402 | || | | | |||| || ||| || || || | |||||| ||||| || | | Sbjct 194458 CAAGA-AGCTCGTTGAGGAAATCATCACCGACGCCGTCGTCATTGAAAAGGAATTCCTGA 194516 Query 46403 CGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCG 46462 | | || |||||| |||||||| ||||||||||| | ||| | ||||| | Sbjct 194517 CCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGATCTCATGAAGCAGTACATTG 194576 Query 46463 AGTTTGTAGCGGACCGACTGCTCG-TGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGC 46521 ||||||| || ||||| ||||| | ||| | || || ||| || || ||| | Sbjct 194577 AGTTTGTCGCCGACCGTCTGCTGGTTGC--CCTCGGCA-ACGA--CAAGGTCTACCGCTC 194631 Query 46522 ----AATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGA 46577 || || ||||| || ||| | |||||||| |||| ||||| || || || || || Sbjct 194632 CACGAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGCAAGACCAACTTCTTTGA 194691 Query 46578 AAAGCGCGTCGGCGAGTA 46595 ||||| || | ||| || Sbjct 194692 GAAGCGTGTTGCCGACTA 194709 >seq13 Length=236849 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| |||||| || | || | |||||||||||| || |||||||| ||| Sbjct 135354 GCCGCCACGCAGACGCAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 135413 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| |||||||| || || |||| | ||||||||||||||| || Sbjct 135414 CAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGG 135473 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | || | || || | |||||| | Sbjct 135474 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCAC 135533 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| ||||| || || || |||||||| Sbjct 135534 CTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||||| | || | || |||||||| || |||||||| || Sbjct 135811 CCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 135870 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| ||| | || |||||||||||||||||||| Sbjct 135871 AGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGA 135930 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | ||||| | ||||||| Sbjct 135931 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACT 135990 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| ||| | ||| || ||||| || || || |||| Sbjct 135991 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGA 136027 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||||| | || | || |||||||| || |||||||| || Sbjct 135583 CCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 135642 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| ||| | || | |||||||||||||||||| Sbjct 135643 AGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGA 135702 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||| | Sbjct 135703 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACC 135762 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| ||||| || || || |||||||| Sbjct 135763 TCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| | || | || |||||||| || |||||||| ||| | Sbjct 136095 CCACCACGGAGACGCAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 136154 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || || |||| | |||||||||||||||||| Sbjct 136155 AGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 136214 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | ||| |||| || || | Sbjct 136215 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGATTCCACC 136274 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || || || Sbjct 136275 TCAAGGGTGATGGTCTTGCCCGT 136297 >seq131 Length=44026 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| ||| || ||||| ||||| ||||||||||| || ||| Sbjct 31459 CCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 31400 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 31399 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 31340 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| || | ||||| ||| ||||| || || || || |||| Sbjct 31339 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 31280 Query 131225 AAATCTGC 131232 || | ||| Sbjct 31279 AACTGTGC 31272 >seq88 Length=56780 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || ||||| ||||| ||||||||||| ||| ||| Sbjct 28289 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 28230 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||| ||||| || || || || || || ||| || ||||| | | Sbjct 28229 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 28170 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||| | |||| ||||| || ||||| || || || || |||| Sbjct 28169 CGATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGA 28110 Query 131225 AAATCTGCAT 131234 |||||||||| Sbjct 28109 AAATCTGCAT 28100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009608013440