Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq516 107 1e-18
>seq516
Length=113924
Score = 107 bits (118), Expect = 1e-18
Identities = 197/286 (69%), Gaps = 2/286 (1%)
Strand=Plus/Plus
Query 6200 GTTCTACCGCTACAAAATGCCGCG-CATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||||||| ||||| ||||| || | || | ||||| |||| || ||||| |||||||
Sbjct 45105 GTTCTACCGGTACAAGATGCCCCGTCTTCAGA-CCAAGATCGAAGGCAAGGGTAACGGTA 45163
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCT 6318
| || || |||||||||||| || | | ||||| || | || | || |||| |
Sbjct 45164 TCAAGACTGTCATTGTCAACCTGTCGGCCGTCGCCCAGTCACTGGCTCGTCCTGGTGCTC 45223
Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378
||| || || || || || | || || || || ||||| | |||| | | | |
Sbjct 45224 ACCTGATCAAGTACTTTGGCTTTGAGCTGGGTGCCCAGACCAACATTGACCCCGCGGATG 45283
Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438
| |||| ||| | ||||| ||||| | | |||||||||||| | ||||||
Sbjct 45284 ACCGCTGGATCATCAACGGCTCGCACGATACCAAGAAGCTGCAGGACCACGTCTACGGCT 45343
Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484
| ||| ||||||||| ||||| | | ||| | ||||| |||||
Sbjct 45344 TCATTGTCAAGTTTGTTCTGTGCAAGAAGTGCAAGAACCCCGAGAC 45389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334944991546571
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |