Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq21 149 8e-31
seq90 113 6e-20
>seq21
Length=78807
Score = 149 bits (164), Expect = 8e-31
Identities = 459/706 (65%), Gaps = 18/706 (3%)
Strand=Plus/Minus
Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077
|||| ||||| || || | || ||||||| | ||| || || | || || || |
Sbjct 61395 CCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCGAGTTCTTCTCAACACGCT 61336
Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137
|||| ||||| ||||| ||||| || || | || || || | || | ||||| |
Sbjct 61335 TCATGAAGAGGTCAGGGATCCACAGCGCCAGGAAAAGGTCACGGGCGCGGACCTCCTCCT 61276
Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197
| || ||||| || || ||||| | | | ||| | |||||||| |||| ||
Sbjct 61275 TGCCGTGGTTCTTGCGCAGGTCAAGGAAGTCAAACACATCCGCGTGCCACGGCTCCAGGT 61216
Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257
| ||||| | | ||||| || ||||| || |||||||| | ||| | || ||||| |
Sbjct 61215 AAATGGCAAAGGCACCAGGGCGCTTGTTGCCGCCCTGATCGACGTAGCGGGCAGTGTTGT 61156
Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317
| | || | || ||| ||||| ||||| ||||| ||||| ||||| || | || ||
Sbjct 61155 TGAACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACG 61096
Query 63318 TTCCACTGGCACGAAT---ATT-ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63373
||| ||||||| || || || ||||| | || || || || ||||| || |||
Sbjct 61095 AGCCAGTGGCACGGATGCGATGGAC--ATTGA--GTCCGATACCACCGGCCATCTTGGAG 61040
Query 63374 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 63433
|| | || || || | ||||| || |||||||| || || ||| |||||| |
Sbjct 61039 ATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCA 60980
Query 63434 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 63493
| || || || |||| ||| | || || || || || | || || ||
Sbjct 60979 ACCAGGAAGCAAGATGACAGCTGGGCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAG 60920
Query 63494 GCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC-----TGAGTCTA 63548
||||| || || | || || | || ||||||||||||||| | | |||
Sbjct 60919 GCGTGGGTGAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATAACACGATCAACTCTG 60860
Query 63549 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 63608
| ||| ||| || || || |||||||| | ||||||||| || | || || |
Sbjct 60859 TCGCCC-----CAAATGCCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAA 60805
Query 63609 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63668
||||| || || |||| || ||| || || | ||| || || ||||| || | ||
Sbjct 60804 TCTTGCCGTCTAGCTTCAGCAGGTACGAACGCTCTAGAGTCTTGAAGCCAAAGTACTGGT 60745
Query 63669 ATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714
| ||||| || ||||| | ||| | |||| || | |||||
Sbjct 60744 AGTTGAAGTCACGGTCGTACACAATGGCAGAGTCCAGCTCTTCCTT 60699
>seq90
Length=200924
Score = 113 bits (124), Expect = 6e-20
Identities = 362/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| || || ||| ||| || || ||||| | ||| | ||||||||||| || ||
Sbjct 194424 CAGGCAAAGTCGGTGTGCAGGCCTTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGA 194365
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|||||||| || |||||||| ||||| || ||||| ||||| | || || |||||
Sbjct 194364 CCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAG 194305
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTCATGT 32837
|| || || || || |||||||| | || | || || | || ||| ||
Sbjct 194304 ATGCCCTCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGGTCGACTCGCGATCGGAA 194245
Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897
|||||||| | ||||| |||||||| | || || || || || || || ||
Sbjct 194244 ATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTG 194185
Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957
|| || ||| | | | || || | || || || || | || ||| |
Sbjct 194184 AACAGGTAGCTGCGCTGGGCAGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTC 194125
Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017
||||| || ||||| || || || || || ||||||||||| | ||||||| |||
Sbjct 194124 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATC 194065
Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077
|| || || | || || || | | || || || || || ||||| ||| |||
Sbjct 194064 TGGACCTCGCCCGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCA 194005
Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGT-CTGGT--GTTAGTTTATTCCAA 33134
||||| |||| || || || ||||| || || | || || | | || |||||
Sbjct 194004 AAAAAGGCCAGGACGTGCGAGATGAAATACTTCTCATCCTTGTTCATGCGGTTGTTCCAG 193945
Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194
|| | || ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 193944 TCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAAGACGCCTCGGCCTTC 193885
Query 33195 TTATACATATTCCAGAT 33211
|| ||||| | ||||||
Sbjct 193884 TTGTACATCTGCCAGAT 193868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633627715063600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |