Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq107 109 1e-18
seq259 96.9 7e-15
>seq107
Length=49618
Score = 109 bits (120), Expect = 1e-18
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||||||||| |||| ||||| || || || |||| ||||||||||| |||
Sbjct 10695 GGTGAGGATCTGTGCAACTGCACCTTCTCTCTTGCCTACGGTGCCAAGATTCTGCTTAAC 10636
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| ||| | ||||||||| | || || ||||| ||||||||| || |
Sbjct 10635 CAGACCCACCTGCGTCTGAAGCGTGGCCAGCGTTACGGTCTGTGCGGTCCCAACGGTTCC 10576
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||||| ||||||||||| |||| ||| | | ||| ||||| | |||
Sbjct 10575 GGCAAGTCGACTCTGATGCGCGCCATCAACAACGAGCAGGTTG-AGGGTTTCCCCAAGCA 10517
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|| ||||| | ||| || | || ||||||||| | |||||
Sbjct 10516 GTCGGAGGTCAAGACCGTCTTCGTCGAGCACGACCTGGACTC 10475
Score = 89.7 bits (98), Expect = 1e-12
Identities = 104/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| ||||| ||||| ||||| || ||| ||||| ||||| | | ||
Sbjct 9293 CTCACTCGCGCATGAAGGGTCTGTCTGGTGGTCAGCGTGTCAAGGTTGTCCTGGCTGCCT 9234
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|||| |||||| | |||||| |||| ||||| || |||||||||||||| ||||||||
Sbjct 9233 GCTC-GTGGCAGCGTCCTCACTTGATTGTTCTTGATGAGCCTACCAACTACCTGGACCGT 9175
Query 280821 GAGAGCCTGGGCGCTCTG 280838
|| ||||| ||||||
Sbjct 9174 GACTCTCTGGGTGCTCTG 9157
>seq259
Length=20262
Score = 96.9 bits (106), Expect = 7e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 279692 GCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCT 279751
||| || || || ||||||||||||||||||||||||||||| || | || ||||| ||
Sbjct 15837 GCCCGTCGGATCGCTGTCGGGTGGTTGGAAGATGAAGCTGGCTCTGGCGCGTGCCATGCT 15896
Query 279752 ACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811
| ||||| || || ||||| || ||||| |||||||| |||| |||||||
Sbjct 15897 GCAAAAGGCCGACGTGCTGCTGCTGGACGAGCCGACCAACCATTTGGATGTTGCCAACGT 15956
Query 279812 AGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCA 279871
||||| | | |||||| | | | | | || | || || ||||| |||||
Sbjct 15957 CAAGTGGCTGGAGAACTACCTCAAGACGCACCCGGACATTACGTCGCTGATTGTTTCTCA 16016
Query 279872 CGACTCTGGCTTCCTAGA 279889
|||| ||| ||||| ||
Sbjct 16017 CGACAGTGGATTCCTGGA 16034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027829675484981
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |