Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq90 437 2e-117 seq21 407 3e-108 >seq90 Length=200924 Score = 437 bits (484), Expect = 2e-117 Identities = 623/864 (72%), Gaps = 36/864 (4%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || |||||| |||||||||||||| ||| Sbjct 193868 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACGGCCGAGGAGATTGATCTG 193927 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415 ||||||| || |||| | || | ||| | | || |||| |||| || Sbjct 193928 TCCAAGGATCTCCACGACTGGAACA-ACCGCATGAACAAGGATGAGAAGTATTTCATCTC 193986 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | |||||||| || || ||||| |||||||| ||||| |||||||||| | Sbjct 193987 GCACGTCCTGGCCTTTTTTGCTGCCTCGGACGGCATTGTCAACGAGAACCTGGTTGAGCG 194046 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 ||| | ||||| ||| | ||||| ||||||||||||||||||||||| || Sbjct 194047 TTTCTCGGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 194106 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592 |||||| | ||||| ||| |||| | ||||||| ||||||||||| ||| || Sbjct 194107 GGAGAACATCCACTCGGAGACGTACTC---GCTGCTCATCGACACGTACATCAAGGAGCC 194163 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 | | |||| | | |||||||| ||||| || || || ||||||||| ||||| Sbjct 194164 TGCCCAGCGCAGCTACCTGTTCAACGCCATCGACACCATTCCCTGCATCCGCCGCAAGGC 194223 Query 42653 GGACTGGGCGCTCAACTGGAT---CGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGT 42709 |||||||| ||||| ||||| ||| || ||| | || || | | || | ||||| Sbjct 194224 CGACTGGGCCCTCAAGTGGATTTCCGA---TCGCGAGTCGACCTTTGCCCAGCGTCTGGT 194280 Query 42710 AGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT 42769 |||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 194281 GGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCCTCCATTTTCTGGCT 194340 Query 42770 ---CAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 ||||| ||| | ||||||||| || ||||| || ||||| || || | || Sbjct 194341 GCGCAAGC--GTGGTCT-GATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGCGA 194397 Query 42827 CGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--G 42884 ||| || ||||| | |||||||||||||| || |||||| ||||| | |||| | Sbjct 194398 CGAAGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCG---CACCT---GAACAACCG 194451 Query 42885 CCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943 ||| | ||| ||| || || |||||||| || ||||| | || || ||||| || Sbjct 194452 CCCCAGCAAGAAGCTCGTTGAGGAAATCATCACCGACGCCGTCGTCATTGAAAAGGAATT 194511 Query 42944 CCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTA 43003 ||| || || | |||||| ||||| ||||||||||| ||| |||||| |||| Sbjct 194512 CCTGACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGATCTCATGAAGCAGTA 194571 Query 43004 CATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTCAGCCGCCTCTACAAC 43061 ||| ||| |||||||||| ||| ||| |||| | || | | ||||| | Sbjct 194572 CATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCC--CTCGGCAACGACAAGGTCTACCGC 194629 Query 43062 ACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121 | || |||||| ||||| ||||||||||||||| ||| |||||||||||||| || Sbjct 194630 TCCACGAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGCAAGACCAACTTCTTT 194689 Query 43122 GAGAAGCGCGTCGCCGACTACCAG 43145 |||||||| || |||||||||||| Sbjct 194690 GAGAAGCGTGTTGCCGACTACCAG 194713 >seq21 Length=78807 Score = 407 bits (450), Expect = 3e-108 Identities = 1235/1891 (65%), Gaps = 63/1891 (3%) Strand=Plus/Minus Query 243735 CCACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCT 243794 |||| ||||||||| ||| || | || |||| || | ||||||||||||||| |||| Sbjct 62577 CCACAGTGAACTGGATGGGCGCAGCAGCAGCCTGCGTACGCAGGTAGTACATGCCCGTCT 62518 Query 243795 TGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTG 243854 |||| || |||| || | ||||||| || | ||| ||| || | Sbjct 62517 TGAGACCCAGCTTCCAGCCGGCAAAGTGCATGCTGGTAATCTTGCCCAT----AG---TA 62465 Query 243855 GGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCT 243914 || ||||| || || |||||| ||||| |||||||| |||| | || | Sbjct 62464 GG--GTCCTT---CATGTGGATGTTGAGCGACTGCGACTGGTCGATAAAGGCACCACGGT 62410 Query 243915 CTGCGGCCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973 | || ||||| | | || | | || || ||||| || | |||||||| | | | Sbjct 62409 CAGCAGCCATCTGCACAACCGTACGT-TGCGAAATCTCCCACACAGTCTTGTACAGCGCC 62351 Query 243974 TTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033 |||| || || |||| | || ||||| ||||| || || | | |||| || Sbjct 62350 TTGATGTCGTCAGGGATGCTAGGAATATTCTGGACCGAACCATTCTCAGCAATGATGCGG 62291 Query 244034 GTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAG----CGCCTCGACCAGGTGCCT 244089 | ||||||||| |||||| |||| | ||| ||| | |||| | | Sbjct 62290 TTCTTCATGTTATCCGACCACAGACCCAGGTCGACCAAATCACGCAACAACCACGGG--- 62234 Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 || || ||||| ||||| || | |||||| || |||||||||| |||| || ||| Sbjct 62233 -TTAACAACCTGGAACTCGCCAGCCAGCACACGACGCTGGTAGATGTTGGAAGTGTACGG 62175 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| |||||||||| ||||||| |||||| || ||||||||||||| | Sbjct 62174 CTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATGGGCGCAAG 62115 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 |||||| ||| | ||| |||||| || ||| | ||||| ||||||||| Sbjct 62114 CAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCTGCTCCTTGAGCGACACCCAGTCCCA 62055 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 |||||| | | ||| ||||||||| |||||||| | |||| | Sbjct 62054 ---------GAGGTCGCTGGGAGTGACATTCCACATGTCGAACTGCAGGATGCCCTGGGA 62004 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCT 244388 ||||| ||||||||| || | ||||| ||| || || ||| | | | | Sbjct 62003 AACGGGCGAGCCCTCGTACGTAGAGTAGGTACCCTCCTCCTTGGCAATATCCATCGAGGC 61944 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 |||| || || |||| ||||||||| || |||||| | |||| | | ||| |||| | Sbjct 61943 CGTC-AGAGCAGCGTGGTAGATGGTTTCAAAGATCTGCGTGTTGAGCTTGCGAGCCTCGG 61885 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | | || || |||| || | || ||| | || ||||| ||||| || || | | Sbjct 61884 CCGACTCAAAAGGCATGCGCAGCGCCAGGAAAGCATCAGCCAGACCCTGGACACCAACAC 61825 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 | || || | ||| ||| ||||| | || || ||||||||||| |||| ||| Sbjct 61824 CAATAGGACGGTGGCGCATGTTGCTGTTGTGAGCCTCAGGCACGGGGTAGTGGTTGACGT 61765 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 | || | ||| |||||||| | | | ||| ||| ||| ||| |||| Sbjct 61764 CAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGTGACCTCGTGTAGCTTCTGGAAGT 61705 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688 ||||||||| || | | || || |||||| | || || | | Sbjct 61704 CGTACTCGTT------CTTG----TTGTAGTCG--ACAAACGCCGGCAGAGCCAGCGAAG 61657 Query 244689 CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGT 244748 |||||||||| ||||| ||||| || | ||||| || |||||||||||| |||| Sbjct 61656 CCAGGTTGCATACGGCAACCTCATCGGGCGCACAGTACTCGATAATCTCGGTGCACAGGT 61597 Query 244749 TACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGT 244808 | || |||||||||||||| || || ||| |||| ||| ||| |||||||| Sbjct 61596 TGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGT 61537 Query 244809 AGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCC 244868 | ||||| || || || |||||| ||| || | || | | || ||| || | | Sbjct 61536 ACAGCATAAACGGGTTGCCCGTCTCGGTCTGAGCCTCCAGAATGGCGTACCATAGCTTCT 61477 Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928 ||||||| || | ||| | |||||| |||||| | |||||| ||||| | Sbjct 61476 GGGCCTTGATCGACGCGCGGCCACGGCCCTCCTGCTCGTACCTTTCGTACAGAGCCTCAA 61417 Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACT 244988 |||| ||| || || | ||||| |||||| |||||||| ||| |||| | Sbjct 61416 ACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGT 61357 Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048 | | | || || | || |||||||||||| |||||||| || ||| |||| |||| Sbjct 61356 CCGAGTTCTTCTCAACACGCTTCATGAAGAGGTCAGGGATCCACAGCGCCAGGAAAAGGT 61297 Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGT 245108 | | || | ||| ||| ||| |||||| | ||| || | |||||||| || | Sbjct 61296 CACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGTCAAACACAT 61237 Query 245109 CGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGT 245168 | ||||||| ||||||| ||| | || | ||| || || ||||||||||| ||||| | Sbjct 61236 CCGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGCCGCCCTGAT 61177 Query 245169 CCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGG 245227 | || | | || | |||||| | ||||| | || | || ||||| ||| Sbjct 61176 CGACGTAGCGGGC-AGTGTTGTTGAACACACGCAGCATGGGAATGATACCGTTGGAGGTA 61118 Query 245228 CCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCC 245283 ||||||||||| ||||| | ||| || | | || ||| ||||||||| || Sbjct 61117 CCGTTGGTGCCGGCAATGTACGAGCCAGTGGCAC---GGATGC-GATGGACATTGAGTCC 61062 Query 245284 TAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTC 245343 | || ||||| ||||||||| | || || |||||| || || |||||||| Sbjct 61061 GATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCCTC 61002 Query 245344 CATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCA 245403 || ||| |||||||| | ||| ||||| || |||||||||| || ||| | | Sbjct 61001 GATCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGATGACAGCTGGGCCTGGGGCGTACC 60942 Query 245404 CGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGT 245463 | ||||||||||||||| ||||||||| ||| | |||||| | || |||||| Sbjct 60941 AGCGTTGAACAGAGTGGGCGAGGCGTGGGTGAAGAACTTGCTCGACATGAGGTTGTACGT 60882 Query 245464 CTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTCATGAGGGTGT 245522 || | | | || | ||||||| || | || ||| | ||| | ||| Sbjct 60881 CTCAATAACACGATCAACTCTGTCGCCCCAAATGCCAACAGC-CACACGCATAATCATGT 60823 Query 245523 GCTGGGGCGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCG 245579 ||||||| |||| || || || | ||| |||| ||| || ||||| || | Sbjct 60822 GCTGGGGACGCTCGACAATCTTGCCGTC---TAGCTTCAGCAGGTACGAACGCTCTAGAG 60766 Query 245580 TCTTGAACCCAAAGTACGAGTAGCCAAAGTC 245610 ||||||| ||||||||| |||| ||||| Sbjct 60765 TCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 60735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944332813906160